Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1669 ATGATGCTCCGTTTCATATTGTTGTTAGTTGTTTCGTGCAAAACCAAGGCTGTGGTGAAATTTCCACCAAATGTGTCGGTTCCAGCAGTGTTAGTGTTCGGAGATTCAATAATGGATACGGGCAACAATAACAACAACATGCAAACATTTGCTAGGTGCAATTTTCCTCCATATGGGAAAGATTTCAAGGGTGGCATTCCAACTGGTCGATTTGGCAATGGAAAGGTTCCATCTGATTTTATAGTTGAAGAATTGGGCATTAAGGAACTTCTACCAGCATATTTAGATCCAAATCTCCAACCCAGCGATCTAATCACTGGTGTTTGCTTTGCATCCGGTGGTTCCGGATTCGATCCTCTCACATCTAAAATAGCGGCAGCTATATCCTTGTCCGGTCAAATAGATCTGTTCAAAGAATACATAGGAAAGCTTAAAAGAATTGTTGGAGCGAACAGAACAAACTTCATACTAGCCAATAGTGTTGTTCTTGTGGTGGAAGGTAGCAATGACATTTCCAACACATACGTTTTGAGTCATGCCAGAGAAGTGCAGTATGATATTCCTAGTTACGCTGACCTAATGGTCAGGTCAGCTTCTAAATTCTTAAAGGAAATATATCAACTAGGGGTTCGGAGGATAGGAGTATTCAGTGCTCCACCAATTGGGTGCGTGCCATTTCAGAGAACAATGATGGGAGGAATAGTTAGAGAATGTGCAGAAAAAAGCAACTACTTGTCCGAGTTATTTAACACTAAACTGTCAAGGGAGCTGGATTCCCTTAACCGGAACTTGCCAAATGCCAGGATGGTTTACCTTGATGTTTACACCCCTCTACTTGATATGATTGTAAATTACCGAAATTATGGTTTTAAAGTTGGAGACAAAGGATGCTGTGGTACAGGCACAATAGAGTCCGCAGTGTTCTGCAACCATTTGGCTCCCACGTGTTCTGATGAGCAAGACTACGTTTTTTGGGATAGTTTTCATCCCTCCGAAAACACTTACAGAAAGCTCGTAGGTCCTATTCTTCAAAAATATATGCACAAGTTCTTCTGA 1056 0.4129 MMLRFILLLVVSCKTKAVVKFPPNVSVPAVLVFGDSIMDTGNNNNNMQTFARCNFPPYGKDFKGGIPTGRFGNGKVPSDFIVEELGIKELLPAYLDPNLQPSDLITGVCFASGGSGFDPLTSKIAAAISLSGQIDLFKEYIGKLKRIVGANRTNFILANSVVLVVEGSNDISNTYVLSHAREVQYDIPSYADLMVRSASKFLKEIYQLGVRRIGVFSAPPIGCVPFQRTMMGGIVRECAEKSNYLSELFNTKLSRELDSLNRNLPNARMVYLDVYTPLLDMIVNYRNYGFKVGDKGCCGTGTIESAVFCNHLAPTCSDEQDYVFWDSFHPSENTYRKLVGPILQKYMHKFF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1669 351 PANTHER GDSL ESTERASE/LIPASE EXL3 10 348 - -
Apr5g1669 351 SUPERFAMILY SGNH hydrolase 159 343 - -
Apr5g1669 351 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 30 41 IPR008265 GO:0006629|GO:0016298
Apr5g1669 351 Pfam GDSL-like Lipase/Acylhydrolase 30 338 IPR001087 GO:0016788
Apr5g1669 351 Gene3D SGNH hydrolase 20 347 IPR036514 -
Apr5g1669 351 CDD SGNH_plant_lipase_like 28 346 IPR035669 -
Apr5g1669 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1669 Apr-Chr5 20278171 20281555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1669 24 344 Pollen Coat Proteome AT1G75910 41.975 3.65e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1669 - - gmx:100793604 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1669 5 20278171 20281555 Apr5g1669 5 20278171 20281555 ECH
Apr9g0653 9 10601829 10605256 Apr5g1669 5 20278171 20281555 PCT
Apr5g1669 5 20278171 20281555 Apr9g0651 9 10572416 10579449 PCT