Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1646 ATGCAGACATCAAAGAAAATGGGATTCGGAAAATGCAGCAGAATCCGACACATCGTAAGGCTCCGCCAAATGCTGCGCCGGTGGCGGACCAAGGCCCACATGTCGGCCCACCCAATACCGTCTGATGTTCCTGCGGGACACGTGGCGGTGTGCGTTGGCACCAACCACAGGAGATTTGTGGTGCGCGCCACTCACCTGAACCACCCCGTCTTCAAGAACCTACTGCTTCAGGCCGAGGAAGAGTACGGATTCTCCAACCACGGTCCTCTCGTCATTCCCTGCGACGAAGTGCTCTTCGAACAGGTGCTCCGGTTCATTTCCCGGTCCTGTTCTGCCAATTCCAACCGGTTCGTAAACCTTGAGGATTGCCACGCTGGCGTCAGAAACAACCTCGATTTCTGGCCCGAATCTCGACCATTACTTCACTGA 429 0.5571 MQTSKKMGFGKCSRIRHIVRLRQMLRRWRTKAHMSAHPIPSDVPAGHVAVCVGTNHRRFVVRATHLNHPVFKNLLLQAEEEYGFSNHGPLVIPCDEVLFEQVLRFISRSCSANSNRFVNLEDCHAGVRNNLDFWPESRPLLH* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1646 142 Pfam Auxin responsive protein 20 105 IPR003676 GO:0009733
Apr5g1646 142 PANTHER SMALL AUXIN-UP RNA-RELATED 10 140 - -
Apr5g1646 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1646 Apr-Chr5 20086335 20086763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1646 9 141 Calmodulin-binding Proteins AT4G34750 52.055 5.27e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1646 K14488 - zju:107435838 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1646 5 20086335 20086763 Apr5g1646 5 20086335 20086763 ECH
Apr9g0567 9 8039683 8040126 Apr5g1646 5 20086335 20086763 PCT