Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1639 ATGGAAGGTGTTGATAAACGAAATAGTGGTGCTGCATTTGGTGCTCCATTGCCAAGACCACCAAACCTGAAACCTGGAATACCACCCTCTCACCCTAATATCAATATTCCACCTTCAACCCCTTATTCCCAATTTTCTCAGCGGTTGCGTTCTCCGGGCTCGTCTCATTCAAGGTCTCTGTCTCAACCTTCAATTTTCTCGTTAGATTCCTTGCCCCCATTGAGTCCTGCTCCTGCTGCTACCTCCATTTTTGACTCAGATATGTCTGTGGAGGAAAGTGTGGTTTCTTCTCATGCTCCTTCGCCTCCTTCTGTTCCCCTTAACAGAGGGAATCCCCTTCTTCCTCCCCGTAAAGGACATAGGCGCTCTAGCAGTGATTCCCCTTTGGGAATTTCTGGTTTTATACAGTCTTCTCCGCCGCAGTTGGTTCCCCCTAGAGGCGAAGGGTCGGGTTTTGAGAAGCCGATTCAGTTAGTCTTGAAGGCGCCGTTTAAGGACGGCGACCGTGCTGATGAGCCTGTGAATGGGAGGAAAGAGGAGGCTGCTGATGATTTGTTTAGGGAATACATGAATTTGGACAACATTGATAGTCTGAACTTTCCTGGTGTGGAGGATAAGGATTTGGATAGCAGGACCAGTGGTTCCAAGACGGTTGAGAGCAGTGATAACGAAGTTGAGAGTCACGCCAATGGGAAAACCAGTGGTGCTCAGGGGGCCAGTTCGAGCTGTTCGGAGGAAAGGAGGGAAGGAATCAAGAGGAGTTCAAATGGGGACATTGCTCCTAGTGGTCGGCATCGAAGGAGTTTCTCCCTGGATAGTTCCATAGGAGACTTTCACATTGAGGATGGGTTACCTAAGCTTCCTCCTTTGAAAAATCAATTTGGTCAACTCTCACCTAGCAATTCAATAGATGGCAAAACGTCTGAAACCACCCCAGAGTTTGGAAATGGAGAATTCAGCAGTGAGGAGCTAAAGAAAATAATGGAAAGTGATAAACTTGCTGAAATTGCCTCGGCTGATCCCAAACGTGCAAGAAGAATTTTGGCTAATCGTCAATCAGCTGCTCGTTCAAAGGAGAGGAAGATGCGGTACATTGCCGAATTGGAGCACAAGGTGCAAACTCTTCAGACAGAAACAACCACATTGTCTACTCAGTTTACTAAATTACAGAGGGATAATACTGAGCTTAAAAATGAGAACAACGAGTACAAACTAAGGCTTCAAGCAATGGAACAACAGTCTCAATTGAAAGATGCTCTGAATGAGACTTTGGATGCTGAAGTCCGGCGTTTGAGGCGCGCTGTTGCAGAACTTGGTGGGGAATCGCTCACGAGTTGCATGGCTCGACAGCTTGCTATTAACCAACAAATGTTCCAGTTAGAGCATCAGCAGCCCAACCAGCATAACCATTTTCTACTGCAAAATCGTCATACTCAGGAAGAGAGAGAGTCTCGGTCACAACAGATTCAAGGCAATGAATTGCATCCCAAGCCTTAA 1497 0.4669 MEGVDKRNSGAAFGAPLPRPPNLKPGIPPSHPNINIPPSTPYSQFSQRLRSPGSSHSRSLSQPSIFSLDSLPPLSPAPAATSIFDSDMSVEESVVSSHAPSPPSVPLNRGNPLLPPRKGHRRSSSDSPLGISGFIQSSPPQLVPPRGEGSGFEKPIQLVLKAPFKDGDRADEPVNGRKEEAADDLFREYMNLDNIDSLNFPGVEDKDLDSRTSGSKTVESSDNEVESHANGKTSGAQGASSSCSEERREGIKRSSNGDIAPSGRHRRSFSLDSSIGDFHIEDGLPKLPPLKNQFGQLSPSNSIDGKTSETTPEFGNGEFSSEELKKIMESDKLAEIASADPKRARRILANRQSAARSKERKMRYIAELEHKVQTLQTETTTLSTQFTKLQRDNTELKNENNEYKLRLQAMEQQSQLKDALNETLDAEVRRLRRAVAELGGESLTSCMARQLAINQQMFQLEHQQPNQHNHFLLQNRHTQEERESRSQQIQGNELHPKP* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1639 498 MobiDBLite consensus disorder prediction 125 139 - -
Apr5g1639 498 MobiDBLite consensus disorder prediction 476 498 - -
Apr5g1639 498 MobiDBLite consensus disorder prediction 227 244 - -
Apr5g1639 498 Coils Coil 417 441 - -
Apr5g1639 498 Pfam bZIP transcription factor 342 400 IPR004827 GO:0003700|GO:0006355
Apr5g1639 498 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 340 403 IPR004827 GO:0003700|GO:0006355
Apr5g1639 498 MobiDBLite consensus disorder prediction 18 36 - -
Apr5g1639 498 MobiDBLite consensus disorder prediction 196 270 - -
Apr5g1639 498 MobiDBLite consensus disorder prediction 86 104 - -
Apr5g1639 498 MobiDBLite consensus disorder prediction 37 69 - -
Apr5g1639 498 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 37 494 - -
Apr5g1639 498 PANTHER BZIP TRANSCRIPTION FACTOR 37 494 - -
Apr5g1639 498 Coils Coil 358 413 - -
Apr5g1639 498 Gene3D - 339 402 - -
Apr5g1639 498 MobiDBLite consensus disorder prediction 1 182 - -
Apr5g1639 498 SUPERFAMILY Leucine zipper domain 342 398 IPR046347 GO:0003700|GO:0006355
Apr5g1639 498 SMART brlzneu 338 402 IPR004827 GO:0003700|GO:0006355
Apr5g1639 498 MobiDBLite consensus disorder prediction 164 182 - -
Apr5g1639 498 CDD bZIP_plant_RF2 343 415 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1639 Apr-Chr5 20028725 20032361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1639 26 459 bZIP Transcription Factor Family AT4G38900 47.799 1.84e-107 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g1639 bZIP_1 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1639 - - gmx:100779731 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1639 5 20028725 20032361 Apr5g1639 5 20028725 20032361 ECH