Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1634 ATGGCAACAACGGTTATATTCCTTAGCTTCATTCTAATCGCATTCTTCACCACCTTAACGGGTGGCCATAACAGCACCGTGAGTCTGTTAGAGATCGAAGCCTTAACGGCCTTCAAACGGAACCTTCACGACCCACTTGGCTCCCTGGACAGTTGGGATCCTTCCACGCCGTTAGCACCCTGTGACTGGCGCGGCATTGTCTGTTACAATAACCGAGTCCACCAACTCACCTTGCCTCGCCTTCAACTCACGGGTCAACTCGCTCCTTCACTCTCCAATCTCTTCCAACTCCGAAAACTCAGTCTCCACTCCAACAACTTCAACGCCTCCATCCCTTCCTCTCTCTCGCAGTGTTTGCTCCTCCGCGTTGTTTACCTTCACAACAACACATTCTCCGGCGAGCTTCCGCCGGCGCTTCTCAACCTCACCAACCTTCAAATCCTCAATGTCGCTCGCAACCTCCTCTTCGGCAATGTCCCCGGCCACCTCTCGACATCCCTACGGTTTCTCGATTTGTCGTCCAACGCATTCTCCGGCGAAATTCCGGCGAATTTTTCTTCCGACTCTCAGCTCCGATTCGTCAACTTGTCCTACAATAGCTTCACCGGCGTAATTCCGGCGAGCATCGGAACGCTGCAACATCTTCAGTATCTGTGGTTGGACTCCAACCGGTTACACGGAACCTTGCCATCGGCTCTCGCGAACTGTTCCTCTCTGGTGCACCTCACCGCAGAGGATAACGCTCTGAGCGGGTTGATTCCGGCCTCCGTGGGAACAATGCCGAAGCTTCAAGTATTGTCGCTGTCGCTGAATCAACTTTCGGGTTCGGTCCCCACGTCTCTGTTTTGCAACGCACACGTGCGAAACGTTCGGCTAGGGTTTAACGCGTTCACGAGCATTTCCACGCCGCCAAGTGAAGAATGCGTTGGTGTTTTGGAGGTTTTGGACCTCAAAGAGAATCACATTGTTCACGCCTCGTTTCCCTCGTGGTTGACCAATGCGACGTCGTTGAGGGTTCTCGATCTTTCTGGAAACTTGTTTTCCGGCACTCTTCCGGTGAATATAGGGAATCTTTTCAGGTTACAGGAACTAAGAGTTTCGAATAATTCGTTATCCGGTGGTGTTCCCGGTAGCATTGTGAATTGTAGGTTGTTGCAGGTTATTGATCTTCAGGGGAACCGGTTTTCTGGTGTTATTCCTTCGTTTCTGGGGCAACTGGGAAACCTGAAAGAGTTGTCTCTTGGGGGTAACCGTTTTACCGGTTCGATACCGGCGAGTTATGGAACGCTTTCTGCGTTGGAGACTCTGAATTTGAGCGAGAATGAACTAACAGGGATTGTGCCAAAGGAGATGATGCAACTGGGTAACGTGAGTGCTTTGAATCTCAGCAACAACAGGTTTTCGGGTGAAGTTACGTCTGATTTTGGGGACTTGAAAGCTTTGGAGGTTCTTAATTTGAGTCACTGTGGGTTTTCGGGAAAGGTTCCTGCTACATTGGGGAATTTGATGAGACTAAGGGTGTTGGATTTGAGCAAGCAGAATCTTTCGGGGGAATTGCCCGTTGAGCTTTTTGGATTGCCGAGCCTGCAAGTTTTGGCACTTGAGGAGAATCGTTTGAGTGGTGCTGTTCCTGAGGGTTTCAGCAGCATAGTTAGTTTACGGTATCTTAATCTCACCTCCAATGGGTTTTTTGGTGACATTCCACAAACTTATGGCTTCCTTAGTTCCTTAATTGTTCTTTCTTTGTCTCACAATAATGTTTCTGGCACAATACCTACTGAGATTGGTGGTTGTTCTCAACTTGAAGTGTTGCAGCTGCGGTCAAATCGTTTGGAGGGTAACATTCCGGGTAGTTTCTCGCGCATTTACCGTTTAAAGGAGCTTAATTTGGGACACAATAGATTGAAGGGTGAAATCCCAGATGAAATATCACAATGTTCTGGTTTGACATCACTCTTGTTGGATAGTAATCACTTCACGGGTCATATACCAGGTTCCTTGTCAAAACTATCAAAATTGACTTTATTGAACATTTCTTCAAATATGTTGACCGGGGAGATACCAGTTGGACTTTCACGCATTTCTGGTTTGAAGTATTTAAATCTTTCGAGAAACAATCTTGAGGGTGAGATTCCGGTAATGCTTGGTGCTAGATTCAATGACCCTTCTGTGTTTGCGATGAATCAGAGGTTATGTGGGAAACCCTTGCAAAGAGAGTGTGCAAATATAAGAAGGCGAAAGAGGAGAAGGCTAATAATTTTTATAGGGGTGGCCGTGGCTGGACTATGCCTTTTGGCGTTGTGTTGTTGTGGCTATGTTTACAGCCTCTTTAGGTGGCGCAACAAGCTTCGAGAAGGGGTAATGGGTGAGAAGAAACGGAGCTCAACAAGTGCAAGTGTGGGAGCAGAGAGGGGTAGTAGAGGGAGTGGTGAAAATGGAGGACCAAAGCTAGTGATGTTCAACAACAAGATCACTTACGCGGAGACATTGGAAGCAACCAGAAACTTTGATGAGGAAAACGTGTTGAGTAGGGGAAGATATGGCCTTGTGTTCAAAGCATATTATCAAGATGGCATGGTTCTCTCCATTCGTCGTCTCGTTGATGGATTCATAGACGAGGGAACCTTCCGCAAAGAAGCAGAATCACTGGGCAAAGTGAAGCATCGAAATTTAACAGTTCTGCGTGGCTATTATGCAGGACCGCCCTCTGATGTAAGGCTTCTTGTTTACGACTACATGCCAAATGGGAACCTAGGAACACTGCTTCAAGAGGCATCACAACAAGATGGCCATGTGCTGAATTGGCCAATGCGTCATCTCATTGCACTAGGCATTGCTCGAGGGCTTGCTTTCTTGCATTCGGTGCCAATAGTGCATGGTGATTTGAAGCCTCAAAATGTTCTCTTTGACGCAGATTTTGAAGCCCATTTGTCTGAATTTGGGTTGGAGCGGTTGACAATAGCAACACCAGCAGAAGCATCCTCGTCGACAACCCAAGTTGGCTCATTAGGCTATGTGTCACCAGAAGTTGCATTAAGTGGGGAAGCAACAAAGGAGGGTGATGTATACAGCTTTGGTATTGTGTTGTTGGAGATCCTAACGGGGAAGAAACCAGTTATGTTCACGCAAGATGAGGATATAGTGAAGTGGGTGAAAAAGCAGTTACAAAGGGGCCAAATTTCGGAATTGTTGGAGCCTGGTTTGCTTGAACTTGACCCTGAGTCATCAGAATGGGAAGAGTTTTTGTTAGGGGTCAAAGTTGGTCTCCTATGCACAGCAACTGATCCTCTTGATCGACCATCTATGTCTGACGTTGCTTTCATGCTCCAAGGTTGCCGGGTCGGACCGGAGATCCCATCCTCAGCTGATCCTACAACACTACCTTCCCCTGCATGA 3396 0.475 MATTVIFLSFILIAFFTTLTGGHNSTVSLLEIEALTAFKRNLHDPLGSLDSWDPSTPLAPCDWRGIVCYNNRVHQLTLPRLQLTGQLAPSLSNLFQLRKLSLHSNNFNASIPSSLSQCLLLRVVYLHNNTFSGELPPALLNLTNLQILNVARNLLFGNVPGHLSTSLRFLDLSSNAFSGEIPANFSSDSQLRFVNLSYNSFTGVIPASIGTLQHLQYLWLDSNRLHGTLPSALANCSSLVHLTAEDNALSGLIPASVGTMPKLQVLSLSLNQLSGSVPTSLFCNAHVRNVRLGFNAFTSISTPPSEECVGVLEVLDLKENHIVHASFPSWLTNATSLRVLDLSGNLFSGTLPVNIGNLFRLQELRVSNNSLSGGVPGSIVNCRLLQVIDLQGNRFSGVIPSFLGQLGNLKELSLGGNRFTGSIPASYGTLSALETLNLSENELTGIVPKEMMQLGNVSALNLSNNRFSGEVTSDFGDLKALEVLNLSHCGFSGKVPATLGNLMRLRVLDLSKQNLSGELPVELFGLPSLQVLALEENRLSGAVPEGFSSIVSLRYLNLTSNGFFGDIPQTYGFLSSLIVLSLSHNNVSGTIPTEIGGCSQLEVLQLRSNRLEGNIPGSFSRIYRLKELNLGHNRLKGEIPDEISQCSGLTSLLLDSNHFTGHIPGSLSKLSKLTLLNISSNMLTGEIPVGLSRISGLKYLNLSRNNLEGEIPVMLGARFNDPSVFAMNQRLCGKPLQRECANIRRRKRRRLIIFIGVAVAGLCLLALCCCGYVYSLFRWRNKLREGVMGEKKRSSTSASVGAERGSRGSGENGGPKLVMFNNKITYAETLEATRNFDEENVLSRGRYGLVFKAYYQDGMVLSIRRLVDGFIDEGTFRKEAESLGKVKHRNLTVLRGYYAGPPSDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVPIVHGDLKPQNVLFDADFEAHLSEFGLERLTIATPAEASSSTTQVGSLGYVSPEVALSGEATKEGDVYSFGIVLLEILTGKKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTATDPLDRPSMSDVAFMLQGCRVGPEIPSSADPTTLPSPA* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1634 1131 SUPERFAMILY Protein kinase-like (PK-like) 815 1120 IPR011009 -
Apr5g1634 1131 Gene3D Ribonuclease Inhibitor 30 183 IPR032675 -
Apr5g1634 1131 MobiDBLite consensus disorder prediction 794 816 - -
Apr5g1634 1131 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
Apr5g1634 1131 Gene3D Ribonuclease Inhibitor 464 748 IPR032675 -
Apr5g1634 1131 SMART serkin_6 836 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1634 1131 Pfam Protein kinase domain 838 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1634 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 957 969 IPR008271 GO:0004672|GO:0006468
Apr5g1634 1131 ProSiteProfiles Protein kinase domain profile. 836 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1634 1131 PANTHER LRR RECEPTOR-LIKE KINASE 2 1127 - -
Apr5g1634 1131 SUPERFAMILY Outer arm dynein light chain 1 73 206 - -
Apr5g1634 1131 SMART LRR_typ_2 142 166 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 260 284 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 670 694 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 574 598 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 478 501 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 94 118 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 526 549 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 406 429 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 212 236 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 335 358 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 622 646 IPR003591 -
Apr5g1634 1131 SMART LRR_typ_2 430 454 IPR003591 -
Apr5g1634 1131 Pfam Leucine Rich Repeat 481 502 IPR001611 GO:0005515
Apr5g1634 1131 SUPERFAMILY L domain-like 161 472 - -
Apr5g1634 1131 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Apr5g1634 1131 SUPERFAMILY L domain-like 473 736 - -
Apr5g1634 1131 Gene3D Ribonuclease Inhibitor 288 379 IPR032675 -
Apr5g1634 1131 Gene3D Transferase(Phosphotransferase) domain 1 913 1117 - -
Apr5g1634 1131 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Apr5g1634 1131 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Apr5g1634 1131 Pfam Leucine rich repeat 600 659 IPR001611 GO:0005515
Apr5g1634 1131 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Apr5g1634 1131 Gene3D Phosphorylase Kinase; domain 1 811 912 - -
Apr5g1634 1131 Gene3D Ribonuclease Inhibitor 380 463 IPR032675 -
Apr5g1634 1131 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1127 - -
Apr5g1634 1131 Gene3D Ribonuclease Inhibitor 184 287 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1634 Apr-Chr5 19978949 19982344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1634 1 1131 Receptor kinase-like Gene Family AT1G75640 63.947 0.0 1358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Apr5g1634 Pkinase 6.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1634 - - gmx:100784917 1795.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1634 5 19978949 19982344 Apr5g1634 5 19978949 19982344 ECH