Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1625 ATGGAGAATGAAGGTGGTTTTCTTTCCTCGATGGATCTGCTACGCTCAGAGCCTATGCAACTGGTTCAATTGATTATTCCAATCGAAGCAGCGTATCGATCCATCTCTTACCTTGGCGATCTCGGTCTCTTCCAATTCAAAGACCTTAATGCAGATAAAAGCCCATTCCAACGGACTTATGCTGCTCAGATTAAAAGATGTGGGGAAATGGCACGTAGGCTGCGGTTATTTAAGGAACAAATGACGAAGGCAGGTTTGTCTCCCTCATCGCTGTCAACAAGAGATGGCCATGTTGATCTGGAAAATCTGGAGGTTAAACTTGAAGAACTGGAAGCTGAGCTACTTGAGATTAAAACAAATAATGAGAAGTTGCAACACACTTACAATGAGCTATTAGAGTATAAGCTTGTTTTAGAGAAGGTTGGTGAGTTTTTCTCCTCAGCACAAAATAATGCTGTAGCTCACCAAAGGGAGCTTGAAGTCCGGACAACTGTTGAAGGGTCCATTGATAGCCCATTATTAATGGAACAACCGGATTCGCCAACATCAAAGCATATTAAGCTGGGGTTTATCAGCGGTCTTGTTCCCAGGGAAAAATCAATTCCTTTCGAAAGAATTATATTTCGTGCTACGAGGGGAAATGTGTTTCTCAAACAGGCTGTGGTTGAACATCCTGTTCTGGATCCTTTGTCAGGAGAAAAGGTTCATAAAAACGTATTTGTTGTCTTTTATTCCGGAGAAAGAGTTAAAAATAAAATTCTAAAAATATGTGATGCTTTTGGAACAAATCGGTATCCTTTCTCAGATGAACTGAGTAAACAATTTCAGATGATAACAGAGGTGTCAGGAAGACTTTCAGAATTGAGGACTACCATTGATACAGGATTGCTTCATTGGAGCACTCTATTGCAGACAATTGGATATCACTATGAGCAGTGGAGCCTTCAGTTGAAGAAGGAAAAATCCATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCTACAAGTCAGATTCACAAAGTATTGCAGCGGGCAACTATAGACTGTAACTCTCAAGTTGGGGCCATATTTCAGGTTTTACAGACAAAGGAATCACCGCCTACCTACTTTCGCACAAACAAATTCACTTCTTCTTTTCAAGAAATTGTAGATGCCTATGGAGTTGCCAAGTACCAGGAAGCAAATCCCGGTGTATACACAGTCATCACGTTTCCATTCCTTTTTGCTGTAATGTTTGGTGATTGGGGGCATGGCACGTGCTTATTACTGGCGGCTTTGTATTTTATAATCAGAGAGAAAAAACTTTCATGTCAGAAACTTGGCGACATAATGGAAATGGCTTTTGGTGGACGCTACGTTATTATGATGATGTCACTCTTTTCAATCTATACCGGATTGATATATAATGAATTCTTCTCTGTTCCATTTGAACTATTTGGACCATCTGCCTATGAATGTCGTGATCCTTCATGCAGGGATATTTCTACAACAGGTTTGATAAAAGTGCGTGACACTTACCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGAGTGAACTGCCATTTCTTAACTCTTTGAAGATGAAGATGTCGATTCTACTGGGAGTATCCCAGATGAATCTTGGAATCATAATGAGCTACTACAATGCAAAATACTTTGAAAACAACATAAATATCTGGTACCAGTTTATTCCCCAGATGATATTCTTAAACAGCTTGTTTGGCTACCTTTCACTCCTCATAATTGTAAAATGGTGCACTGGATCACAGGCTGACCTGTATCATGTGATGATATACATGTTTCTAAGCCCAACTGATGATTTGGGTGAAAACCAGCTTTTTGTTGGCCAACAGTTCCTTCAACTCGTGTTACTACTTTTGGCACTTGTTGCTGTACCATGGATGTTATTACCGAAGCCGTTTCTCCTGAAGAAGCAACATCAAGAAAGGCATCAAGGTCAATCTTACTCTTTGCTCTACGGTGCGGGTGACCCTCTTGAATCAGATTCACATAGTATTCCCCAAGACCATGAGGAATTTGAGTTCAGCGAGGTTTTTGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTGTCTAATACAGCTTCATATCTCCGTTTATGGGCCCTCAGCCTAGCTCATTCCGAGTTGTCGAGCGTTTTCTATGACAAAGTTCTGCTTCTGGCCTGGGGGTTTAATAACACTGTTGTTCTCGTTGTTGGCATTTTAGTTTTTGTATGTGCAACTGTTGGTGTGTTACTGTTAATGGAAACTCTAAGTGCTTTCTTGCATGCTTTGAGGCTTCACTGGGTAGAGTTCCAAAACAAATTTTACGAGGGAGATGGTTACAAGTTCATTCCATTTTCATTTACATTACTTACGGATGAGGATGAACTGTAA 2457 0.4037 MENEGGFLSSMDLLRSEPMQLVQLIIPIEAAYRSISYLGDLGLFQFKDLNADKSPFQRTYAAQIKRCGEMARRLRLFKEQMTKAGLSPSSLSTRDGHVDLENLEVKLEELEAELLEIKTNNEKLQHTYNELLEYKLVLEKVGEFFSSAQNNAVAHQRELEVRTTVEGSIDSPLLMEQPDSPTSKHIKLGFISGLVPREKSIPFERIIFRATRGNVFLKQAVVEHPVLDPLSGEKVHKNVFVVFYSGERVKNKILKICDAFGTNRYPFSDELSKQFQMITEVSGRLSELRTTIDTGLLHWSTLLQTIGYHYEQWSLQLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIHKVLQRATIDCNSQVGAIFQVLQTKESPPTYFRTNKFTSSFQEIVDAYGVAKYQEANPGVYTVITFPFLFAVMFGDWGHGTCLLLAALYFIIREKKLSCQKLGDIMEMAFGGRYVIMMMSLFSIYTGLIYNEFFSVPFELFGPSAYECRDPSCRDISTTGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIIMSYYNAKYFENNINIWYQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQQFLQLVLLLLALVAVPWMLLPKPFLLKKQHQERHQGQSYSLLYGAGDPLESDSHSIPQDHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTVVLVVGILVFVCATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFIPFSFTLLTDEDEL* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1625 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Apr5g1625 818 PANTHER VACUOLAR PROTON ATPASES 11 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Apr5g1625 818 Pfam V-type ATPase 116kDa subunit family 37 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Apr5g1625 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 11 818 - -
Apr5g1625 818 Coils Coil 93 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1625 Apr-Chr5 19891746 19899453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1625 11 817 Primary Pumps ATPases(2) AT4G39080 73.639 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1625 K02154 - gmx:100805813 1407.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1625 5 19891746 19899453 Apr5g1625 5 19891746 19899453 ECH