Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1608 ATGGCCTCATCAAGTGGAAACTCCTCCACGTCCACCAAAATTCAGAGCTCAGGCTCTGAGGAAGAATTGCAGGTTCTGATTGATGATGAAAGGAGGAACAAGAGAAAGCAATCAAATAGAGAATCAGCAAGAAGATCTCGGATGCGGAAGCAGAATCACTTGGATGATTTAACGAAGCAGGTGTCACAGCTCACAAAGGACAACAGGGAAATTCTGACGAGCATAAACATCACCACACAACACTATCTGAATGTTGAGGCAGAGAATTCGGTTCTGAGGGCCCAGATGGGAGAGCTTAGCCAAAGGCTTCAGTCACTGAATGATATCATCAACATCATCAACAACACAACCACCACCGGGTCCTATGAAAGGGATTGTTATCTAACAAGTGCACAAAATTTCATGAATATGCACTGCCTTAACCAACCCATTTTTCAATGGTGA 444 0.4392 MASSSGNSSTSTKIQSSGSEEELQVLIDDERRNKRKQSNRESARRSRMRKQNHLDDLTKQVSQLTKDNREILTSINITTQHYLNVEAENSVLRAQMGELSQRLQSLNDIINIINNTTTTGSYERDCYLTSAQNFMNMHCLNQPIFQW* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1608 147 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Apr5g1608 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Apr5g1608 147 PANTHER BZIP TRANSCRIPTION FACTOR 1 145 - -
Apr5g1608 147 SUPERFAMILY Leucine zipper domain 31 84 IPR046347 GO:0003700|GO:0006355
Apr5g1608 147 Gene3D - 29 83 - -
Apr5g1608 147 MobiDBLite consensus disorder prediction 44 61 - -
Apr5g1608 147 Pfam bZIP transcription factor 31 81 IPR004827 GO:0003700|GO:0006355
Apr5g1608 147 MobiDBLite consensus disorder prediction 1 22 - -
Apr5g1608 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 145 - -
Apr5g1608 147 Coils Coil 40 74 - -
Apr5g1608 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Apr5g1608 147 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Apr5g1608 147 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1608 Apr-Chr5 19759555 19760999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1608 29 145 bZIP Transcription Factor Family AT4G34590 52.308 1.15e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g1608 bZIP_1 3.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1608 K25786 - gmx:778188 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1608 5 19759555 19760999 Apr5g1608 5 19759555 19760999 ECH