Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1605 ATGTTAAAATCTATGGAACTCCCTGATTGTATCTATAGTAGCCAACCAGTTACCATTCTCCCATGTGCTCCAACACCAAAACATTCTCTCTATCTCTCTAATCTTGACGACCAAAAGTTCTTGAGGTTCTCCATTAAGTATATGTACCTCTTCAAGAAATCCGTGAGCTTGGATATCTTGAAGTCGTCTTTATCAAGAGTTCTAGTGGATTATTACCCTTTAGCTGGAAGGTTGAGGAGGACTAGCTCCCAAGATGATCACAAGCTTGAGGTGGATTGCAATGGAGAAGGTGCTGTGTTTGCCGAGGCTTTCATGGACACTACTACTCAAGAATTACTTGAACCTTCCAAGACTCCAAACAAGTCATGGAGGAAGTTCTTGTATAAGGTCGAAGCTCAGAGTTTCCTAGATGTCCCCCCTCTTGTAGTCCAGGTAACAAGTCTGTGCTGCGGGGGAATGATCCTGTGCACCGCGATCAGCCACTGCCTATGCGACGGCATCGGCACGTCTCAGTTTCTCCACGCTTGGGCCCAACTCACCGCCAAGCCCCAAGCCCATTTGACCATCATGCCCTTTCACTGCCGACACCCTCTAAAGCCCAGAAAACCCCCACAAGTAAAGTTCCGGCATCCGGGATACACCGCAGCAAGCCCAAGCCCTCAAGTGAACCTCTTCAACCTGATACAGTCACACCCCTTGGTACCCACATCCCTCACCCTCACCCCTTCCCACCTCCTTTGCCTCAAGAAGCAGTGCATCCCCCCTCTCAAGTGCACCTCATTCGAAGCAGTTGCGGCGCACACGTGGCGCTCTTGGATTCGATCACTTAACCCATCACCGCCCTCCACTCTCCTTGTCAAACTACTGTTCTCGGTCAACGTTAGAACAATAGTTAATCTACCACACGGGTATTACGGAAACGGGTTTTTACTAGCGTGCGCTGAAAGCACCGTAGAGGATTTAGTGAAGGGCAAGCTTGAGCATGGTGTGAAACTTGTGCAAGAAGGCAAGGCGAGGTTGAAAGATGAAGAGTACGTAAGATCAGTGGTTGATTTGTTGGAGGACAAGACGGTAAAAACAGATCTTTCTACTACTTTGGTTATATCACAGTGGTCTAAACTGGGTTTGGAAGAGGTTGATTTTGGAGAGGGTAAGGCTTTGCATATGGGTCCTTTGACCACTGATATTTACTGCTTGTTTTTGCCGGTTATGGATGATGTTGACGCCGTGAGAGTGGTATTGTCTGTGCCGGAGAACATGGTCGACTCTTTTCACTATCACATGAAACAAGGTTGGCAAACTAAACAACAAAATGGAGATGATGATAACAATGGGTATCATGAAAATGGATTCCTATGA 1359 0.4724 MLKSMELPDCIYSSQPVTILPCAPTPKHSLYLSNLDDQKFLRFSIKYMYLFKKSVSLDILKSSLSRVLVDYYPLAGRLRRTSSQDDHKLEVDCNGEGAVFAEAFMDTTTQELLEPSKTPNKSWRKFLYKVEAQSFLDVPPLVVQVTSLCCGGMILCTAISHCLCDGIGTSQFLHAWAQLTAKPQAHLTIMPFHCRHPLKPRKPPQVKFRHPGYTAASPSPQVNLFNLIQSHPLVPTSLTLTPSHLLCLKKQCIPPLKCTSFEAVAAHTWRSWIRSLNPSPPSTLLVKLLFSVNVRTIVNLPHGYYGNGFLLACAESTVEDLVKGKLEHGVKLVQEGKARLKDEEYVRSVVDLLEDKTVKTDLSTTLVISQWSKLGLEEVDFGEGKALHMGPLTTDIYCLFLPVMDDVDAVRVVLSVPENMVDSFHYHMKQGWQTKQQNGDDDNNGYHENGFL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1605 452 Gene3D - 11 215 IPR023213 -
Apr5g1605 452 PANTHER BNAC03G58010D PROTEIN 10 436 - -
Apr5g1605 452 Gene3D - 227 428 IPR023213 -
Apr5g1605 452 Pfam Transferase family 18 428 - -
Apr5g1605 452 MobiDBLite consensus disorder prediction 433 452 - -
Apr5g1605 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1605 Apr-Chr5 19737783 19740905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1605 19 391 Monolignol Biosynthesis Gene Families AT5G48930 30.227 4.03e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1605 - - gmx:100810619 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1605 5 19737783 19740905 Apr5g1605 5 19737783 19740905 ECH