Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1602 ATGATTTCCCAATTGGTAAAGGAGCACCCTTACATTTGTTGCTATGTTGGTGTCTTATTGGTGTTTTTATCATGTCAAAAAGCGTGGACGTTTTGGTGCAAAAACAACAAGTCCAGTGTGGGCATTCCTCCGGGAAATCGAGGATTACCGTTTGTTGGAGAGACACTTCAGTTCATGGCTGCCATCAACAGCAGCAAAGGAGTCTACGAATTTGTCCGAGTTCGCCGCCACCGGTATGGAAATTGCTTCAAGACAAAGTTGTTTGGGGAAACGCACGTTTTTATTTCGAGCAGGGAGTCAGCAAAAGCGATTCTAAACAACGAGGGAGGGAAATTCTCAAAGAGGTACATAAAATCAATGGCAGAGCTCGTTGGACCCGATAGCTTGCTCTGCGCTCCACAACAGCATCACAAACTCATTCGTAATCGTCTCTTAAGTTTGTTCTCAACTGATTCCTTGTCCTCCTTCGTTAAACTGTTTGATGCACTCGTTCTTGAAGCTATGACTAGCTGGACATGTGGATCCGTTGTCGTCATACAAGATGAAGCACTCAAGCTGGCTTGTAAGGCGATGTGCAAAATGCTAACAAGCATTGAGAGTAGCGACGAATTAGCGATTATGCAAAAGGAGGTTGGTCGTTTGTGCGAAGCAATGCTAGCATTGCCTGTGAGATTACCCTGGACCAGATTTTATAAAGGCCTTGAGGCTCGAAAAAAAATTATGGACATATTGGAAAAAGATATAAGTGAAAGAAGAAGTGGAATTGCAACTCACCAGGCAGATTTTCTTCAACAACTTCTAGAAGAAGATGATGATAAACTAAACGAGGATGAAATCACAAGGCTAACAGATAGAGAGATCAAAGACAATATCTTGACTATGATAATTGCAGGACAAGACACAATAGCAAATGCAATGACATGGATGATTAAATATGTGGACGAGAATCGGGAGGTTTTTAATACGCTCATGAAGGAGCAGCTTCAGATTCAGAAGAAAGGGACAAAAAATGTGTATCTTCCACTTGAGGCTCTTAATGAGATGCCATATGCTTCTAAGGTCGTAAAAGAAGCGTTAAGGATGGCATCCGTAGTACAGTGGTTGCCAAGAGTAGCACTTGAGGACTGTGTGATTGAAGGATTTAAAATCAAGAAAGGCTGGAACATTAACATTGATGCTAGATCGATACACCACGATCCAACTGTGTACATTGATCCGAATGTATTCAATCCTTCAAGATTTCCTGCCGAGTCAAAACCATACAGCTTCTTAGCTTTTGGGATGGGAGGAAGGACATGCCTCGGGAAGAACATGGCTAAAGCTATGATGTTGGTGTTTCTCCACCGTTTCATCACCAATTACAAGTGGAAGGTGATCGATTCTGATTCAAGTATTCAGAAATGGGCGGTTTTTACAAAACTTAAGAGTGGATATCCTGTTCGTTTGATATCTACAATGGATGACAAATGCAAAACCATGTAA 1482 0.4177 MISQLVKEHPYICCYVGVLLVFLSCQKAWTFWCKNNKSSVGIPPGNRGLPFVGETLQFMAAINSSKGVYEFVRVRRHRYGNCFKTKLFGETHVFISSRESAKAILNNEGGKFSKRYIKSMAELVGPDSLLCAPQQHHKLIRNRLLSLFSTDSLSSFVKLFDALVLEAMTSWTCGSVVVIQDEALKLACKAMCKMLTSIESSDELAIMQKEVGRLCEAMLALPVRLPWTRFYKGLEARKKIMDILEKDISERRSGIATHQADFLQQLLEEDDDKLNEDEITRLTDREIKDNILTMIIAGQDTIANAMTWMIKYVDENREVFNTLMKEQLQIQKKGTKNVYLPLEALNEMPYASKVVKEALRMASVVQWLPRVALEDCVIEGFKIKKGWNINIDARSIHHDPTVYIDPNVFNPSRFPAESKPYSFLAFGMGGRTCLGKNMAKAMMLVFLHRFITNYKWKVIDSDSSIQKWAVFTKLKSGYPVRLISTMDDKCKTM* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1602 493 Pfam Cytochrome P450 43 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Apr5g1602 493 PANTHER CYTOCHROME P450 26 11 485 - -
Apr5g1602 493 SUPERFAMILY Cytochrome P450 38 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Apr5g1602 493 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 Gene3D Cytochrome P450 32 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1602 493 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 11 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1602 Apr-Chr5 19711635 19715671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1602 37 456 Cytochrome P450 AT1G19630 61.466 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1602 - - lang:109327951 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1602 5 19711635 19715671 Apr5g1602 5 19711635 19715671 ECH