Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1576 ATGGCCAAACGCTTCAAACTGAAATTCAATGTCCCTTCCTTTCAAATATGTCGCTCAAAAAACCTTTCCTCTTTCCCAGGAAATCCAGTTCCTGCCATTTACCGTCTTTCTCCCGTGAACCCCAAAGCTCACGACATAGGGTATTCAAACGCGCCTTCTCCACCGCCACCGTCAAAGATCACGTCCCTAGCACGTGGCTGTCAAATGTGCCGCGACAATAACGAGAAGAAAGTTAAATCCCGAGGCCGCAAAAGCACGTCGAGCGTTCCGTTGAGGAGAAGCGATTTTCTAATCGACAAAGTCAACGAAGAAGAGAGCGAAACTCTGATTTCTTGCTCGACAAGTTTCTCCAACGAGTTTTGTCATGGTGAGGAGAAAGATTTGAGTGGCAGGCACGGAAGGAAGATGAGCAGCGTGAATAGGGTTCAGAGAGTGAGGTTTCAGAGTTCGGAGAATCGCAGAGGGGCGGAAACGACGCAGGTGAAGAAGAAGACTGTGACATCGTCAAGGGCGTCCGTGACACGGAGCAGTGTGGAGGGGGAGGTTAAGGAGAGCTTTGCCGTGATGAAAAAGTCCAAGGATCCTTACGAAGACTTCAAGAAATCGATGATGGAGATGATAACGGAGATGGAGATGACTGAAGCGAAGGACTTGGAGCAACTCTTGCAGTGTTTTCTGGCTTTGAATTCACGGAGTTATCACGCAGTGATTGTGCGAGCGTTCATGGAGATTTGGCAACAAATGTTCACTTGGAAACCTACGTCCATCAACGATCTTCAAACAGACATTAAATCTCATATGCAACAGTGA 810 0.4778 MAKRFKLKFNVPSFQICRSKNLSSFPGNPVPAIYRLSPVNPKAHDIGYSNAPSPPPPSKITSLARGCQMCRDNNEKKVKSRGRKSTSSVPLRRSDFLIDKVNEEESETLISCSTSFSNEFCHGEEKDLSGRHGRKMSSVNRVQRVRFQSSENRRGAETTQVKKKTVTSSRASVTRSSVEGEVKESFAVMKKSKDPYEDFKKSMMEMITEMEMTEAKDLEQLLQCFLALNSRSYHAVIVRAFMEIWQQMFTWKPTSINDLQTDIKSHMQQ* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1576 269 MobiDBLite consensus disorder prediction 149 174 - -
Apr5g1576 269 Pfam Transcriptional repressor, ovate 192 249 IPR006458 -
Apr5g1576 269 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 186 248 IPR006458 -
Apr5g1576 269 ProSiteProfiles OVATE domain profile. 188 247 IPR006458 -
Apr5g1576 269 PANTHER TRANSCRIPTION REPRESSOR OFP7 55 252 - -
Apr5g1576 269 PANTHER TRANSCRIPTION REPRESSOR OFP7 1 57 - -
Apr5g1576 269 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 57 IPR038933 GO:0045892
Apr5g1576 269 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 252 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1576 Apr-Chr5 19577172 19577981 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr5g1576 Ovate 3.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1576 - - gmx:102662518 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1576 5 19577172 19577981 Apr5g1576 5 19577172 19577981 ECH