Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1568 ATGACTTCGGACGGAGCAACGTCGGCGGCCACGAATCGGAGGAAGCCGTCGTGGAGGGAGAGGGAGAACAACCGGAGGAGAGAGAGGCGGAGAAGAGCCATAGCAGCGAAGATTTACTCTGGCCTTAGGGCTCAGGGTAACTACAATTTGCCCAAACACTGTGACAACAACGAGGTCTTGAAGGCTCTCTGCGCTGAAGCTGGTTGGACCGTCGAAGACGACGGCACCACATATCGCAAGGGATGCAGGGCACCACCACCAGGTGATGGTGTAGGCACTTCTAACAGAAACACTCCTTTTTCTTCACAAAATCCAAGTCCTCTTTCGTCATCATTTCCGAGTCCAATTCCATCCTACCAAGTAAGCCCTTCGTCCTCCTCTTTCCCCAGCCCTTCTCGTTTGGATGCCATTGCCAACAACCCATCAAACCTCATTCCCTACATTCGTAACGTGTTCCCTGCGTCTCTCCCTCCTCTGAGGATATCAAACAGCGCCCCTGTCACCCCACCTCTCTCCTCGCCAACTTCCAGAAATCCTAAACCAATTCCCACATGGGACTCAATTGCCAAAGCATCTATGGCATCCTTCAACCACAATCACCATCACAATCACAACTACAACCACAACCACAACCACCCTTTCTTTGCAGCTTCTGCCCCTGCTAGCCCAACACACCGCCACCTTTATACCCCACCCACTATTCCCGAATGTGATGAGTCTGACACCTCCACTGTTGAGTCTGGCCAGTGGCTCAACTTCCAAGCATTTGCACCTTCTGCTTCTGCTCTGCCAATCTCTCCCACTTTGAACTTCATCAAACCTGTGAGTAAGCAGCTCAACCTCCCCGGGGATAACAGAATCCAAGAGATGAGAAGTTCAGAGGCTGAGTTTGGGGTGCAGGTGAAGCCTTGGGTTGGGGAGAGGATTCATGAAGTGGGATTGGATGATTTGGAGCTCACGCTTGGAAGTGGGAAGACGCCTAGTTAG 987 0.5208 MTSDGATSAATNRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCRAPPPGDGVGTSNRNTPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRLDAIANNPSNLIPYIRNVFPASLPPLRISNSAPVTPPLSSPTSRNPKPIPTWDSIAKASMASFNHNHHHNHNYNHNHNHPFFAASAPASPTHRHLYTPPTIPECDESDTSTVESGQWLNFQAFAPSASALPISPTLNFIKPVSKQLNLPGDNRIQEMRSSEAEFGVQVKPWVGERIHEVGLDDLELTLGSGKTPS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1568 328 MobiDBLite consensus disorder prediction 14 29 - -
Apr5g1568 328 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 149 IPR008540 -
Apr5g1568 328 MobiDBLite consensus disorder prediction 1 31 - -
Apr5g1568 328 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 326 - -
Apr5g1568 328 MobiDBLite consensus disorder prediction 75 133 - -
Apr5g1568 328 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 326 IPR033264 GO:0003700|GO:0006351|GO:0009742
Apr5g1568 328 MobiDBLite consensus disorder prediction 91 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1568 Apr-Chr5 19519999 19521865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1568 1 325 BZR Transcription Factor Family AT1G75080 65.205 3.34e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Apr5g1568 BES1_N 1.3e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1568 K14503 - gmx:100781888 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1568 5 19519999 19521865 Apr5g1568 5 19519999 19521865 ECH