LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g1558	ATGGCATCGATTACCACCGTCTCAGCACCTCCTTTACTACAACTAGATTTTTCAATGAAGAGAAACCGCTCCTCCAAGCGTCCTTTAACTCGATTGAAAGCCTCAGTCTCAGAAACGACGTCGCTGTCAGTGGAAGAGACCCCCACCCTTCCTCTGCGTAAGATCCCCGGAGATTACGGCATCCCCATCGTAGGACCCATAAAAGACCGTCTCGACTATTTCTACAACCAAGGCCGCGATATCTTCTTCCAAACGCGCATCCAAAAGTACCAATCCACCGTCTTCCGCGCCAACATGCCCCCTGGCCCCTTCATCTCCTCCAACCCAAACGTCGTCGTTTTGCTCGACGCTAAATCCTTCCCCGTCCTCTTCGACGTCACTAAAGTGGAGAAGCGCGACGTCTTCACTGGGACCTTCATGCCCTCCACCGATCTCACCGGCGGTTACCGAATCCTCTCCTACCTCGACCCCTCCGAACCCAAACACGAACCACTCAAGCGCCTCATGTTCTCCCTCCTCAAGTCTCGCACCCGCCACGTCATCCCAGAGTTCCGTTCAACCTATACGACCCTCTTCGACACGCTGGAGAAGCGACTTGCCGCAAATGGAAAAGCTAGCTTCGCAGAAGCTAACGATCAAGCAGCGTTTAACTTCCTCGGTCGCGCCCTTTATGGGAGCAACCCCACTGACACCAACTTGGGACGTGACGGTCCAAGCATTGTTCAGAAATGGGTGCTGTTCCAGCTAAGCCCAATTCTGGTATTGGGCCTGCCCAAACTCATCGAGGATCCAATTTTCCACACCTTCCGTCTCCCTCCTTTTCTCATTAAAAAAGATTACCAGAGACTCTACGATTTCTTCTACGAGTCATCGGGTTCTGTTTTAGACGAAGCGGTGCGTCTTGGCCTCTCCAAAGAAGAAGCGTGCCACAATTTGTTATTCGCCACGTGCTTCAATTCGTTCGGGGGCATCAAGATTTTTTTCCCCACCGTGTTGAAATGGATAGCACGAGCGGGCGTTAAACTTCATGCCCGGTTAGCGGAGGAAGTGAGGTCCGCCGTCAAATCTAACGGAAGTGAGGTCTCGATGGCGGCGATGGAAGCCATGCCGTTAATGAAATCGGTGGTTTACGAGGCGTTTCGAATCGAACCGCCGGTGCCGTTGCAGTACGGGAAGGCGAAGAAGGACTTAGTGGTTGAGAGCCACGAGAACGCGTTTTTGGTGAAGGAAGGGGAGATGCTTTTTGGGTTTCAACCGTTTGCGACGAAGGATCCGAAGATATTCGAGAGAGGGGATGAGTTTGTGGCTGATAGGTTCGTCGGTGAAGGAGAGAAGATGTTGAAGCACGTGCTTTGGTCGAACGGTCCTGAGACGGAGGAACCCAGCGTTTGTAACAAGCAATGTGCTGGGAAGGATTTTGTGATGTTGTTTTCTAGGCTTCTGGTTGTGGAGTTGTTTCTTCGTTATGATTCTTTTGATATTCAAGTGGAAAGGTCACCCTTGGGTTCTGCCGTTACCTTCACCTCTCTCAAGAGAGCAAGCTTTTAG	1548	0.5155	MASITTVSAPPLLQLDFSMKRNRSSKRPLTRLKASVSETTSLSVEETPTLPLRKIPGDYGIPIVGPIKDRLDYFYNQGRDIFFQTRIQKYQSTVFRANMPPGPFISSNPNVVVLLDAKSFPVLFDVTKVEKRDVFTGTFMPSTDLTGGYRILSYLDPSEPKHEPLKRLMFSLLKSRTRHVIPEFRSTYTTLFDTLEKRLAANGKASFAEANDQAAFNFLGRALYGSNPTDTNLGRDGPSIVQKWVLFQLSPILVLGLPKLIEDPIFHTFRLPPFLIKKDYQRLYDFFYESSGSVLDEAVRLGLSKEEACHNLLFATCFNSFGGIKIFFPTVLKWIARAGVKLHARLAEEVRSAVKSNGSEVSMAAMEAMPLMKSVVYEAFRIEPPVPLQYGKAKKDLVVESHENAFLVKEGEMLFGFQPFATKDPKIFERGDEFVADRFVGEGEKMLKHVLWSNGPETEEPSVCNKQCAGKDFVMLFSRLLVVELFLRYDSFDIQVERSPLGSAVTFTSLKRASF*	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g1558	515	PANTHER	ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE	36	513	-	-
	Apr5g1558	515	PRINTS	E-class P450 group IV signature	369	385	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr5g1558	515	PRINTS	E-class P450 group IV signature	422	440	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr5g1558	515	PRINTS	E-class P450 group IV signature	468	486	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr5g1558	515	Pfam	Cytochrome P450	343	444	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr5g1558	515	SUPERFAMILY	Cytochrome P450	50	491	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr5g1558	515	Gene3D	Cytochrome P450	47	515	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr5g1558	515	PANTHER	CYTOCHROME P450 26	36	513	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g1558	Apr-Chr5	19415243	19417193	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr5g1558	1	515	Cytochrome P450	AT5G42650	64.299	0.0	674

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g1558	K01723		-	gmx:100807192	826.624

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr5g1558	5	19415243	19417193	Apr5g1558	5	19415243	19417193	ECH