Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1556 ATGGTTCTCACGATTCAGTATCTAGATGCAGCAGTAGCTGTAGTTATTGGCTTTCTACTGTTTGCTTACTTGCACTTCATCAAGAGGGGTAGAGCAAGTGATTCCTGTAAGCCACCCGTAGCCGCCGGTGGCTGGCCTTTGATCGGTCATCTTTACCTCTTAGCTGGTTCAGCTCAGCCTCCTCACATAACCTTAGGAGCCTTAGCAGACAAATATGGATCAATATTCAGCATCCGAATCGGTGTGCACCCTGCTGTTGTGGTCAACACTTGGGAGCTCGCCAAAGAGTGTTTCACTACTCTTGATCTCTTTGTCTCTTCTCGTCCCAAATATACCGCTGCCAAAATCTTGGGACACAACTATGCTAATTTTGGGTTCTCCCCTTACGGACACTTCTGGCGTGAGATGCGTAAGATAACCGCCTCAGAGTTACTTTCTGCTAGCCGGTTTGAACTGCTACGAGATATTAGAGATTCCGAGGTGAAAAGCTCGTTGAAAGAACTGTATAGATCATGGGTCGAAAATAGAGGAGGCTACGATGATTTTTCAGTGGAGATGAAGAAGTGGTTTGGAGACATGAATCTGAACGTGATTCTGAGGATGATTGCGGGAAAGCGATACTCCACCAAAAGTGAAGATGAGCAACAAGTTAGGCGAATTCGGGGGGTTTTCAGAGAGTTCTTCCGTTTGACGGGATTGTTTGTGGTTGGTGACGCGATTCCTGCTCTTGGGTGGCTTGATTTTGGAGGCGAAGTGAAAGAGATGAAGAATACGGCTATAGAAATGGACAGCATCGTTGGTGAATGGTTAGAAGAGCATCGCCGGAAAAGAGATAGCTCAGGTGAGAGTGCGACTAAAACAGAACAAGACTTCATTGATGTGTTGTTGTCCGTCCTTAACGGCGTTGATCTTGCTGGTTACGATGTTGATACCGTCATAAAAGGCACCTGCTCGACCTTAATTGCTGGGGCAACTGATACAACAACTGTTACCTTGACGTGGGGGCTCTCCTTATTGCTGAATAATCGCCATGCTTTGATCAAAATTCAAGAGGAACTGGATGAGCACGTGGGTAAGGAAAGGCTAGTGAATGAATCAGACATCAAGAAATTAGTTTATCTTCAAGCCGTAGTTAAAGAAACAATGCGATTGTATCCTGCTGGGCCATTATCAGGCCCACGTGAATTCACACAGGACTGTTCCTTGGGTGGTTATCATATTAAAGCTGGTACACGATTTATTTTGAACATTTGGAAGCTACATAGAGACCCACGAGTATGGTTGGACGCGTTGGAGTTTCAGCCCGAAAGGTTTTTGGACACCCATAAGGGTGTGGATGTCAAGGGTCAACATTTTGAGCTCCTTCCTTTTGGCGGTGGAAGAAGGGCTTGCCCTGGCATATCATTTGGTCTTCAAATGACACACTTGGCATTAGCATCTTTTCTGCAAGCATTTGAAGTTATGACTCCATCTAATGCTCAAGTTGATATGAGCGCCACTTTTGGACTCACAAACATCAAAACCACTCCACTTGATGTTTTAGTCAAGCCTCGATTATCACATCAGCTTCTCTTTGTTGACGAAGTTAGAGGAAACCCACACATTAATCAACATTCCATGCGTTGA 1626 0.4514 MVLTIQYLDAAVAVVIGFLLFAYLHFIKRGRASDSCKPPVAAGGWPLIGHLYLLAGSAQPPHITLGALADKYGSIFSIRIGVHPAVVVNTWELAKECFTTLDLFVSSRPKYTAAKILGHNYANFGFSPYGHFWREMRKITASELLSASRFELLRDIRDSEVKSSLKELYRSWVENRGGYDDFSVEMKKWFGDMNLNVILRMIAGKRYSTKSEDEQQVRRIRGVFREFFRLTGLFVVGDAIPALGWLDFGGEVKEMKNTAIEMDSIVGEWLEEHRRKRDSSGESATKTEQDFIDVLLSVLNGVDLAGYDVDTVIKGTCSTLIAGATDTTTVTLTWGLSLLLNNRHALIKIQEELDEHVGKERLVNESDIKKLVYLQAVVKETMRLYPAGPLSGPREFTQDCSLGGYHIKAGTRFILNIWKLHRDPRVWLDALEFQPERFLDTHKGVDVKGQHFELLPFGGGRRACPGISFGLQMTHLALASFLQAFEVMTPSNAQVDMSATFGLTNIKTTPLDVLVKPRLSHQLLFVDEVRGNPHINQHSMR* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1556 541 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PANTHER CYTOCHROME P450 82C3-RELATED 11 523 - -
Apr5g1556 541 Gene3D Cytochrome P450 33 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 Pfam Cytochrome P450 42 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Apr5g1556 541 SUPERFAMILY Cytochrome P450 44 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1556 541 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1556 Apr-Chr5 19380279 19384601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1556 13 524 Cytochrome P450 AT4G31940 47.500 8.43e-177 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1556 - - gmx:100810391 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1556 5 19380279 19384601 Apr5g1556 5 19380279 19384601 ECH