Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1555 ATGGACGTAGCAGCCGTTGCTGGAGTTATTGGCTTACTGCTAATTTCTTGCTACGTGTTCTTCTCCTTCTTGAAGAGGGGTAGTGCAGGTCGTGCTCCCAAGCCACCGGTAGCAGCCGGTAGCTGGCCTTTGATCGGTCATCTTTACCTCTTAGGTGGTTCCTCTAAGCCTCCTTACGAAACCTTAGGAGCTTTAGCAGACAAATATGGAGCAATATTCAGCATCCGAATCGGTGTGTACCCTGCTGTGGTGGTTAACAGTTGGGAGCTTGCCAAAGAGTGTTTTACTACTCTTGATGTTATCGTCTCTTCTCGTCCCAAATTCACTGCTGCAAAAATCTTGACATACAACTATGCTAGTTTTGCGTTCTCCCCATATGGAAAATTCTGGCGTGAGATGCGTAAGATAACGGTTTCAGAGTTACTTTCCACTCGCCGGTTTGAACTGCTTCGAGATGTTAGAGATTCGGAGGTGCAGAGTTTGTTAAAAGAACTGTACAGAACATGGGTGGAGAAAAGAGGTGACTCCGATGATTTGTTGGTGGAGATGAAGCAATGGTTAGGAGACATCAATCTGAACGCGTTTCTGAGGATGATTGCGGGAAAGCGATTCTCCGCCGAAAATGAGCAACAGGCGAGGCGAGTTAGGAGGGTACTCAGAGAGTTTTTCCGTTTGATGGGATTATTTGTGGTTGGGGACGCGATTCCTGCTCTTGGGTGGCTTGATTTGGGAGGCGAAGTGAAAAATATGAAAAATACGGCTATAGAGTTGGATCGCATCGTTGTTGAATGGTTAGAAGACCATCGCCAGAAAAGAGACACTGGTGAAACTATCGCAGAACAAGACTTCATTGATGTGTTGCTTTCCGTCATTGATGGCGTCGACCTTGCTGGTTACGATGCTGACAACGTCATAAAAGCCACTTGCTCGACCTTAATTGCAGCCTCAGTAGATACTACGACAGTTTCCACCATATGGGCACTCTCGTTATTGATGAATAATCGACATGCTCTAAAGAAAGTTCAAGATGAATTGGATGAGCACGTGGGCAAGGAAAGACTAGTGCATGATTCAGATATTAACAAATTAGTTTACCTACAAGCTGTAGTTAAAGAGACACTGCGATTGTATCCACCGCCTTTCTCAGGTCCGCGGGAATTCACACAGGACTGTATCTTAGGTGGCTACCATATTCCAGCAGGTTCCCGATTTATCTTGAACCTTTGGAAAATGCACAGAGACCCACAAGTATGGTCAGAACCATCAGAGTTTCAGCCAGAAAGGTTTTTGGGAACGCACACGGGTATGGATGTCAAGGGTAAGCATTTTGAGCTTCTTCCCTTTGGCTGTGGACGAAGGTCGTGTCCTGGCCTATCATTTGCCCTTCAAATGACACACTTGACATTAGCAGCTTTGTTGCAAGCATTTGAAGTCACTACCCCATCCAATGCCCAGGTTGATATGACTGCCACTTTTGGACTCACAGTCATCAAATCCACTCCCCTCGAGATTTTGATCAAACCTCGTTTATCACATCAGCTTCTCCTTATAGATGAAGCTAAAGAAAATTCAGTACATTAA 1581 0.4535 MDVAAVAGVIGLLLISCYVFFSFLKRGSAGRAPKPPVAAGSWPLIGHLYLLGGSSKPPYETLGALADKYGAIFSIRIGVYPAVVVNSWELAKECFTTLDVIVSSRPKFTAAKILTYNYASFAFSPYGKFWREMRKITVSELLSTRRFELLRDVRDSEVQSLLKELYRTWVEKRGDSDDLLVEMKQWLGDINLNAFLRMIAGKRFSAENEQQARRVRRVLREFFRLMGLFVVGDAIPALGWLDLGGEVKNMKNTAIELDRIVVEWLEDHRQKRDTGETIAEQDFIDVLLSVIDGVDLAGYDADNVIKATCSTLIAASVDTTTVSTIWALSLLMNNRHALKKVQDELDEHVGKERLVHDSDINKLVYLQAVVKETLRLYPPPFSGPREFTQDCILGGYHIPAGSRFILNLWKMHRDPQVWSEPSEFQPERFLGTHTGMDVKGKHFELLPFGCGRRSCPGLSFALQMTHLTLAALLQAFEVTTPSNAQVDMTATFGLTVIKSTPLEILIKPRLSHQLLLIDEAKENSVH* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1555 526 SUPERFAMILY Cytochrome P450 41 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 Pfam Cytochrome P450 39 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Apr5g1555 526 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 Gene3D Cytochrome P450 30 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1555 526 PANTHER CYTOCHROME P450 82C3-RELATED 9 514 - -
Apr5g1555 526 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1555 Apr-Chr5 19377839 19381201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1555 15 516 Cytochrome P450 AT4G31940 48.054 5.42e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1555 - - gmx:100810391 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1555 5 19377839 19381201 Apr5g1555 5 19377839 19381201 ECH