Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1554 ATGCAGACGTTTTCTCTTTTCTCTGGTCGAAGCACTACAAAAGCAATAACAACCTTACATTCAGCATATACTGTCATGGACGTAGCAGCGGTTGTTGGAGTCATTGGTTTACTATTAATTTCTTACTACGTGTTCTTCTCCTTCATCAAGAGGGGTGGTGCAGGCCATGGTCGCAAGCCACCGGTAGCAGCCGGTTGCTGGCCATTGATTGGTCATCTTTATCTCTTCGGTGGTTCCACTAAGCCTCCTTACGAAACCTTAGGAGCCTTAGCAGATAAATATGGAGCAATATTCAGCATCCACATCGGTTTGCACCCTGCTGTGGTGGTTAACACTTGGGAGCTTGCCAAAGAGTGTTTCACTACTCTTGATCTCTTTGTCTCTTCTCGTCCCAAATATACCGCTACAAAAATCTTGGGATACGACTATGCTAATTTTGGGTTCTCCCCTTACGGGGATTTCTGGCGTGAGATGCATAAGATAACGGTTTCAGAGTTGCTCTCCTCTCGCCGGTTTGAACTGCTTCATGATATAAGAGATTCAGAGGTGCAGGGCTCGTTGAAAGAACTGTATAGAGCGTCGGCGGAGAAAATAGGTGGCTCTGGTGATTTGTTGGTGGAGATGAACCAGTGGTTTGGAGTCTCGAATCTGAACGTGATTCTGAGGATGATTGCAGGAAAGCGATACACAAGTGGAAATGAGCAACAGGTAAGGCGATTGCAGGGGGTTCTCAGAGAGTTCCTCCGTTTGACGGGATTATTTGTGGTTGGGGACGCGATTCCTGCTCTTGGGTGGCTTGATTTTGGAGGCCAAGTGAAAGAGATGAAGAATACGGCTATAGAAATGGACAGCATCGTTGGTGAATGGTTAGAAGAACATCGCCGGAAAAGAGAGTCCGGGGAGACTAAAACAGAACAAGACTTCATTGATGTGTTGCTGTCCGTCATCCACCACGTCCATCTTGCTGGTTATGATGCTGAAACTGTCATAAAAGCCACTTGCTCAGCGCTAATTGTTGGGGCTGCAGATACTACGATATCTGCCATGATATGGGGACTCTCGTTATTGCTGAATAATCGGCATGCTCTAAAGAAAGTTCAAGATGAATTGGATGAGCACGTTGGCAAGGAAAGACTAGTGAATGATTCAGATGTTAACAAATTAGTTTACCTTCAAGCCGTAGTTAAAGAGACACTGCGATTGTATCCACCTGCGCCACTCTCAGGTCCACGCGAATTCACGGAGGACTGTACCTTAGGTGGCTACCATATTCAAGCAAATACCCGATTAATTTTGAACCTTTGGAAATTGCATAGGGACCCACGCGTATGGTCAGAACCATTAGAGTTTCGACCAGAAAGGTTTTTGGACACTCACAAGGGTGTGGACGTGAAGGGTCGGCATTTTGAGCTTCTTCCCTTTGGTAGTGGAAGAAGGTCATGCCCTGGCTTATCATTTGGCCTTCAAATGACACACTTAGCATTAGCAACTTTTTTGCAAGCATTTGAGGTCACAACCCCGTCCAATGCCCAAGTTGATATGAGCGCCACTTTTGGACTCACAATCATGAAAGCCACTCCACTTGAGGTTTTAATCAAACCTCGTCTATCGCAGTTGTTTCTCTTTAGGGGTTAA 1635 0.4581 MQTFSLFSGRSTTKAITTLHSAYTVMDVAAVVGVIGLLLISYYVFFSFIKRGGAGHGRKPPVAAGCWPLIGHLYLFGGSTKPPYETLGALADKYGAIFSIHIGLHPAVVVNTWELAKECFTTLDLFVSSRPKYTATKILGYDYANFGFSPYGDFWREMHKITVSELLSSRRFELLHDIRDSEVQGSLKELYRASAEKIGGSGDLLVEMNQWFGVSNLNVILRMIAGKRYTSGNEQQVRRLQGVLREFLRLTGLFVVGDAIPALGWLDFGGQVKEMKNTAIEMDSIVGEWLEEHRRKRESGETKTEQDFIDVLLSVIHHVHLAGYDAETVIKATCSALIVGAADTTISAMIWGLSLLLNNRHALKKVQDELDEHVGKERLVNDSDVNKLVYLQAVVKETLRLYPPAPLSGPREFTEDCTLGGYHIQANTRLILNLWKLHRDPRVWSEPLEFRPERFLDTHKGVDVKGRHFELLPFGSGRRSCPGLSFGLQMTHLALATFLQAFEVTTPSNAQVDMSATFGLTIMKATPLEVLIKPRLSQLFLFRG* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1554 544 PANTHER CYTOCHROME P450 82C3-RELATED 34 538 - -
Apr5g1554 544 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 Pfam Cytochrome P450 66 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Apr5g1554 544 PANTHER CYTOCHROME P450 FAMILY PROTEIN 34 538 - -
Apr5g1554 544 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 SUPERFAMILY Cytochrome P450 66 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1554 544 Gene3D Cytochrome P450 56 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1554 Apr-Chr5 19373152 19375223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1554 40 538 Cytochrome P450 AT4G31940 48.824 2.77e-175 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1554 - - gmx:100810391 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1554 5 19373152 19375223 Apr5g1554 5 19373152 19375223 ECH