Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1553 ATGAATTGTTCTTTACTATTAACAATTGTAGCTACTCTAGTCCTCTTGTTATTTCTCTGGTACGCTTTTCTAGTAAAGAAGAGAATGAAAGGAGGTAACAAGAGTAAAGAGGCTCCAGTTCCAGCTGGTGTATGGCCAGTTATTGGTCACCTCCACCTTTTGGGTGGTGATGATCAACTTCTTTATCGAACACTTGGAGCAATGGCTGATGAACATGGGCCAGCATTCAATATTTGGCTTGGTAGTCACAGAGCATTTGTGTTGAGTGACTGGGAAGTGGCAAGAGAATGTTTCACAACTAATGACAAAGCACTTGCCTCACGTCCCACAACAGTTGCTGCAAAGCACATGGGCTACAACTATGCCGTGCTTGGTTTTGCGCCTCACAGTCCGTTTTGGTGTGAAATGAGAAAGATTGCAACTCTTGAACTTCTTTCCAACCGCAGGCTTGAAAGGCTTAAGCATGTAGTGTCTGAGCTCAACGTGGGTATGAGGGAGTTATACAACTCTTGGGTCCACAATAGCGCTCAGTCTGTGCTTGTGGAGCTAGATAGATGGTTGGAGGATTTGATTCTTAATATGGTGGTTAGAATGGTGCCCGGGAAACGTTACTTTGGTGCCTCATCTGTGTGTGATGATGATGATGAGGCAAGGCGGTGTCAGAAGGCTATTGATCAGTTCTTTCATCTGATTGGCATTTTTGTGGTTTCAGATGCGATTCCGTTTTTGCGTTGGTTTGATGTGCAAGGGCATGAGAGGGCAATGAAGACAGCTAAGGAGTTGGATGCTCTACTTGAAGGGTGGCTACAAGAGCATCGGAAGCAAAGAGTTAATGGTAAGACGGAGGCTGAAAAGGATTTCATTGATGTCATGTTGTCACTTCAGGAGGGAGGTCATTTGTCTAATTTCCAATATGATTCGGATACAAGTATCAAATCCACATGCCTAGCTCTTATAGTTGGTGGCAGTGATACCACAGCAGGCACACTTACTTGGGCCATCTCATTACTGCTCAACAATCGTCAAGCATTAAAGAAGGCACAAGAAGAATTGGACTTGAATGTTGAGAAGCATCGGCAAGTTGAGGAATCAGATATAATAAACCTTGTATATCTTCAAGCCATTATCAAGGAAACCCTGCGACTATACCCAGCTGGTCCACTCCTAGAACCAAGGGAAGTCCAAGAAGATTGTAATGTTGCTGGTTATCATGTTCCTGCTGGAACACGCTTGGTGGTTAACTTGTGGAAGATTCATAGGGATCCAAGGATTTGGCATGACCCTTCTGCTTTTCGACCAGAGAGATTTGTGACAAGCCATGCACTTGATGTTAGAGGTCAAAACTTTGAACTCATTCCCTTTGGCTCTGGTAGAAGGTCATGTCCTGGCATGTCCTTTGCACTCCTAGTGTTAACACTTGCTCGTCTGCTTCATGCATTTGAATTTGCAACCCCATCAGATGAACCAGTTGACATGACTGAGAGTCCAGGTACCATTCCTAGAGCAACTCCATTGGAAGTTCTTCTTACTCCTTGCCTTCCAGCCAAATTATATGCCTAA 1560 0.4423 MNCSLLLTIVATLVLLLFLWYAFLVKKRMKGGNKSKEAPVPAGVWPVIGHLHLLGGDDQLLYRTLGAMADEHGPAFNIWLGSHRAFVLSDWEVARECFTTNDKALASRPTTVAAKHMGYNYAVLGFAPHSPFWCEMRKIATLELLSNRRLERLKHVVSELNVGMRELYNSWVHNSAQSVLVELDRWLEDLILNMVVRMVPGKRYFGASSVCDDDDEARRCQKAIDQFFHLIGIFVVSDAIPFLRWFDVQGHERAMKTAKELDALLEGWLQEHRKQRVNGKTEAEKDFIDVMLSLQEGGHLSNFQYDSDTSIKSTCLALIVGGSDTTAGTLTWAISLLLNNRQALKKAQEELDLNVEKHRQVEESDIINLVYLQAIIKETLRLYPAGPLLEPREVQEDCNVAGYHVPAGTRLVVNLWKIHRDPRIWHDPSAFRPERFVTSHALDVRGQNFELIPFGSGRRSCPGMSFALLVLTLARLLHAFEFATPSDEPVDMTESPGTIPRATPLEVLLTPCLPAKLYA* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1553 519 Pfam Cytochrome P450 41 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 Gene3D Cytochrome P450 23 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Apr5g1553 519 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 SUPERFAMILY Cytochrome P450 41 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1553 519 Coils Coil 344 364 - -
Apr5g1553 519 PANTHER STEROID 21-HYDROXYLASE-RELATED 8 514 - -
Apr5g1553 519 PANTHER CYTOCHROME P450 CYP82D47-LIKE 8 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1553 Apr-Chr5 19367960 19370031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1553 1 518 Cytochrome P450 AT4G31940 62.571 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1553 K23136 - gmx:100811993 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1553 5 19367960 19370031 Apr5g1553 5 19367960 19370031 ECH