Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1542 ATGCAGAAGCATTTGGGACGAGGAGTACTTGTGTTCCTTCTTGTGATCACGTGTGTGGCTGCAGGAAGCGAGGGAAGAAGCATTTTGGTTGGTGACTCTCAAGGTTGGCGTGCGGGCACTAACTACACTCAATGGGCTATCCAAAATAGTCCCTTCCACATAAATGACACACTTGTGTTCAAGTATCCGCCACCAGGAAATTCAACTGTTGCTCAGAGTGTTTACTTACTACCAAACCTCTGGAGTTACATAACCTGCGAATTCAGAGGGGCAAAGCTATTGGGGAGTGCAAATGAAGGGGCTGGTGAGGGCTTTACGGTTGATCTCAATCAATGGAGGCCTTACTATTTTGCCTCTGCAGAGGGAAACGCCTATGATTGCATTGCTGGCCTCACCAAGTTCATCGCTGTTCCATCTACACGCTCCCTCTCCTTCACGCATCACCCAAATTAA 453 0.4812 MQKHLGRGVLVFLLVITCVAAGSEGRSILVGDSQGWRAGTNYTQWAIQNSPFHINDTLVFKYPPPGNSTVAQSVYLLPNLWSYITCEFRGAKLLGSANEGAGEGFTVDLNQWRPYYFASAEGNAYDCIAGLTKFIAVPSTRSLSFTHHPN* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1542 150 PANTHER GLYCINE-RICH PROTEIN-LIKE 7 142 - -
Apr5g1542 150 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 7 142 - -
Apr5g1542 150 ProSiteProfiles Phytocyanin domain profile. 26 140 IPR003245 GO:0009055
Apr5g1542 150 Gene3D - 24 139 IPR008972 -
Apr5g1542 150 SUPERFAMILY Cupredoxins 26 137 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1542 Apr-Chr5 19299401 19300039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1542 8 119 Phytocyanin Superfamily AT3G01070 33.036 8.83e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1542 - - lang:109342628 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1542 5 19299401 19300039 Apr5g1542 5 19299401 19300039 ECH