Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1522 ATGGCCGTAGCAATAGGAAGAAGCTTCGCTTTTCGGCCACACTCTTTATTCAACAGCAAGAGCATAGATAGACCTTCACCAGCTGGAAGTTTCTCGTGGCTTGGGCATGCTGCTGCCACGCCACGTTGCAAGCGAATTCGTGTCGCAGCACAACAGCGACCCACATGGCTTCCAGGACTTGATCCACCACCTCATCTTGATGGAACTCTGGCTGGGGATTTTGGGTTCGACCCACTTGGGCTTGGAGAGGATCCCGAAAGCTTAAGGTGGTATGTACAGGCAGAGCTGGTTCATGCTCGCTTTGCAATGCTTGGGGTATTGGGAATTCTAGTGACCGATCTACTTCGCGTCACAGGACTTAGTAAGATACCAGTTTGGTTTGAAGCCGGCGCAGTAAAATACGAGCTTGCCAATACTCAGACACTCTTCATTGTTCAACTACTTCTTATGGGGTTTGCCGAAACAAAAAGGTACATGGATTTCATTAGCCCTGGATCTCAAGCCAAAGAGGGGTCTTTCTTTGGATTGGAAGCTTCACTAGAAGGTTTAGAGCCAGGGTACCCTGGGGGTCCTCTTCTAAATCCTCTTGGCCTAGCTAAAGACATTAACAATGCTCATGATTGGAAGCTTAAAGAGATAAAAAATGGGCGACTTGCAATGGTGGCCATGCTTGGCATCTTTGTACAAGCATCAGTGACTCATGTTGGACCAATTGATAACCTTGTGGAGCATCTCTCCAATCCATGGCATAAAACTATTATTCAGACCCTTGCAAGTTCTAGCTCCTAG 789 0.4753 MAVAIGRSFAFRPHSLFNSKSIDRPSPAGSFSWLGHAAATPRCKRIRVAAQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMLGVLGILVTDLLRVTGLSKIPVWFEAGAVKYELANTQTLFIVQLLLMGFAETKRYMDFISPGSQAKEGSFFGLEASLEGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1522 262 Pfam Chlorophyll A-B binding protein 62 230 IPR022796 -
Apr5g1522 262 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 1 259 - -
Apr5g1522 262 SUPERFAMILY Chlorophyll a-b binding protein 47 259 - -
Apr5g1522 262 Gene3D Chlorophyll a/b binding protein domain 55 262 - -
Apr5g1522 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 259 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1522 Apr-Chr5 19144966 19146923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1522 45 254 Chloroplast and Mitochondria Gene Families AT3G61470 47.393 1.66e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1522 K08911 - gmx:100804934 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1522 5 19144966 19146923 Apr5g1522 5 19144966 19146923 ECH