Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1516 ATGAACTTCAAGAGCTTTGGAAATGAGGCGGCCGGCGGCGACGGCGGCGGAGGGAGGCCGGTGGGGAACTTCTCCCTGGCGCGGCAACCGTCGGTGTACTCGTTGACGTTCGACGAGTTCATGAGCAGCATGGGAGGGTCGGGGAAGGACTTCGGATCGATGAACATGGACGAGTTGCTGAAGAACATTTGGAGCGCCGAAGAGGTTCAGACAATGGCGTCGGGGAGTGCCACTGGCTTAGACGGCGGCGTTGGAGTTAGCCATTTGCAGAAGCAAGGGTCGTTGACGCTGCCACGAACCCTAAGCCAGAAAACCGTGGATGAGGTTTGGAAGGATATCTCGAAAGAGTATGGGAACGAGGGAGGTCCTAATTTGGCGCAGACGCAAAGGCAACCAACGTTGGGAGAGATGACGTTGGAGGAGTTCTTGGCGAGAGCTGGTGTTACCAGGGATGATGCGAAACCTAATAATGCTGTGTTTGTTGATCTGTCTCGTGCTGTCAATAACAGTGGTTTAGGGTTGGGGTTTCAGGCTCAGGCCCAGCAATTGAACAAGGTTACCGGTTTGATGGGTAACAGGTTGCCTGTGAATAATGATCCATTGGTGGGTCTTCAATCTTCTGCTGCTAATTTGCCTTTGAATGTTAATGGGGTGAGATCATCCAATCAGCAGCAACAGCTGCAGAGTCCACAGCATCAGCATCAGCATCAACAGCAGCAGATATTTCCTAAGCAGACTGCTATGTCTTATGCAGCTCAGATGCCTCAAGGAATAAGGGGTGGAATGGTGGGGCTTGCTGCTGATCAGGGTCTGAATGGGAATCTTGTGCAAGGTGGTGGGATTGGTATGGTTGGTTTGGCACCTGGACCGGTTCATGTTACTACTGGGTCACCTGCTGCTAACCAAATGTCCAGTGATAAAATTGGGAAGAGCAATGGTGATACTTCTTCCGTGTCGCCGGTTCCTTATGTCTTCAATGGTGGCCTGCGAGGGAGGAAGAGTGGGGGAGCTGTGGAGAAGGTGATTGAGAGGAGGCAGAGGAGAATGATAAAGAATAGAGAGTCAGCTGCTAGATCGCGGGCTCGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAGTTAAAAGAGGAGAACCAAGAGCTTCAGCAAAAACAGGCAGAAATCATGGAAATTCAGAAAAATCAAGTTAAGGAAATGATGAATTTGCAACGAGAAGTCAAGAGAAGACGATTAAGACGAACACAAACTGGTCCATGTTAG 1269 0.5035 MNFKSFGNEAAGGDGGGGRPVGNFSLARQPSVYSLTFDEFMSSMGGSGKDFGSMNMDELLKNIWSAEEVQTMASGSATGLDGGVGVSHLQKQGSLTLPRTLSQKTVDEVWKDISKEYGNEGGPNLAQTQRQPTLGEMTLEEFLARAGVTRDDAKPNNAVFVDLSRAVNNSGLGLGFQAQAQQLNKVTGLMGNRLPVNNDPLVGLQSSAANLPLNVNGVRSSNQQQQLQSPQHQHQHQQQQIFPKQTAMSYAAQMPQGIRGGMVGLAADQGLNGNLVQGGGIGMVGLAPGPVHVTTGSPAANQMSSDKIGKSNGDTSSVSPVPYVFNGGLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQQKQAEIMEIQKNQVKEMMNLQREVKRRRLRRTQTGPC* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1516 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 347 362 IPR004827 GO:0003700|GO:0006355
Apr5g1516 422 Pfam bZIP transcription factor 344 394 IPR004827 GO:0003700|GO:0006355
Apr5g1516 422 SMART brlzneu 340 405 IPR004827 GO:0003700|GO:0006355
Apr5g1516 422 SUPERFAMILY Leucine zipper domain 344 393 IPR046347 GO:0003700|GO:0006355
Apr5g1516 422 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 421 IPR043452 GO:0003700|GO:0045893
Apr5g1516 422 CDD bZIP_plant_BZIP46 344 398 - -
Apr5g1516 422 Gene3D - 342 399 - -
Apr5g1516 422 Coils Coil 360 412 - -
Apr5g1516 422 MobiDBLite consensus disorder prediction 1 23 - -
Apr5g1516 422 MobiDBLite consensus disorder prediction 219 239 - -
Apr5g1516 422 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 15 421 - -
Apr5g1516 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 342 393 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1516 Apr-Chr5 19110020 19114642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1516 26 376 bZIP Transcription Factor Family AT1G45249 52.219 2.32e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g1516 bZIP_1 3.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1516 K14432 - gmx:100819313 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1516 5 19110020 19114642 Apr5g1516 5 19110020 19114642 ECH