Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1508 ATGAGTACTCCTACCATTCGTCGCGTTTCAGAATGCTTCATCAAGCCACAGCGTCTCACCCATGAATCAAACCAAACATGCTATTTAACCCCTTGGGATTATAGCATGTTGTCTGCACACTGTATTCAAAAGGGCCTGCTATTCCAGAAGCCCGCACCACTAGTTAATCAACAAGATTTCATCAACAATCTTTTGGACAAGCTCAAACACTCACTTTCTCTCACCCTATTCCATTTCTATCCATTGTGTGGACGCTTTGTCACACACAAAACCCAAGACCCTCCCACTTATTCCATTTTCGTTGATTGTATCAATAGTGATGGAGCCAAATTCATCTATGCTACTTTAGATTTGACCATATCTGACATCATCTCCCCCGTTGATGTCCCACCCATTGTTCAATCATTCTTTGATCAACACAAAGCACTTAACCATGATGGTCACACCATGCCCTTGTTGTCCATCCAGGTCACTGAATTGTTGGATGGTGTTTTTATAGGTTGTTCCATGAACCACTCTATTGGTGATGGCACTTCGTATTGGAATTTCTTCAATACATGGTCCGAGATCTTTCGAGGCCAAGCTAAAGGGCATGAACATGATACTCCCATTTCACTCCAACCCATTCTCAAACGCTGGTTTCCAGAGGGCTATGGTCCAATGCTCAATCTTCCCTTTAAACATCATGACGAGTTTATTAGTAGGTTTGAAGCGCCCCAACTCAGAGAGAGAATCTTTCACTTTTCAACAGATTCCATTGCTAAACTAAAAGCAAAGGCTAACTCTGAGTCTGACACGACAAAAATCTCTTCATTCCAATCCTTATCAGCACTTGTTTGGAGATCCATAACTCGTGCGCGCCGCTTGCCACATAATCAGAGAACAAGTTGCAAGCTGTCCATAAACAACCGCACAAGATTGGAACCGCCACTGCCTCAGGAGTACTTTGGAAACTCAATTCATACGCTGAATGCGGGCACCACGGTTGGGGAATTGCTTGAGAATGATCTGGGTTGGGCAGCGTGGAAGTTGCACGTGACTATTGCAAACCATAACGATAGAGCGGTGCTGCAGCTGCTGAAAGAGTGGTTAAAGTCTCCTTCGATATATCAACTTGGTCAATTCTTTGACCCGTTCTGTGTGATGATGGGTAGCTCACCAAGGTTCAACATGTACGGAAATGAATTTGGAATGGGTAAAGCAATAGCTGTTAGAAGTGGCTATGCCAACAAAGTTGATGGAAAGGTTACGTCATACCCAGGTCGTGAAGGAGGAGGAAGCGTGGATTTAGAAGTGTGCCTTTCACCAGAGACAATGAGTGCATTGGAATCAGACCAAGAGTTCATGAATTCTGTCTCAGTGTGTGCACCATATTGA 1377 0.4401 MSTPTIRRVSECFIKPQRLTHESNQTCYLTPWDYSMLSAHCIQKGLLFQKPAPLVNQQDFINNLLDKLKHSLSLTLFHFYPLCGRFVTHKTQDPPTYSIFVDCINSDGAKFIYATLDLTISDIISPVDVPPIVQSFFDQHKALNHDGHTMPLLSIQVTELLDGVFIGCSMNHSIGDGTSYWNFFNTWSEIFRGQAKGHEHDTPISLQPILKRWFPEGYGPMLNLPFKHHDEFISRFEAPQLRERIFHFSTDSIAKLKAKANSESDTTKISSFQSLSALVWRSITRARRLPHNQRTSCKLSINNRTRLEPPLPQEYFGNSIHTLNAGTTVGELLENDLGWAAWKLHVTIANHNDRAVLQLLKEWLKSPSIYQLGQFFDPFCVMMGSSPRFNMYGNEFGMGKAIAVRSGYANKVDGKVTSYPGREGGGSVDLEVCLSPETMSALESDQEFMNSVSVCAPY* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1508 458 Gene3D - 230 445 IPR023213 -
Apr5g1508 458 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 452 - -
Apr5g1508 458 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 452 - -
Apr5g1508 458 Pfam Transferase family 12 449 - -
Apr5g1508 458 Gene3D - 8 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1508 Apr-Chr5 19026702 19028078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1508 68 443 Monolignol Biosynthesis Gene Families AT5G48930 28.642 2.37e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1508 - - gmx:100787228 759.985