Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1507 ATGAGTACCCCTGCCGTTCGACCCATATCAGAGTGCTTTGTCAAGCCGCACCCAGAAAGGCCAAATATGAACCAAATATGCTATCTATCTCCTTGGGATATTATTTTGGTGTCTTCACACTACATCCAGAAAGGCCTTCTCTTCAAGAAGCCCGCATCACTTGTTAATCATCAAGATTTCATTCAGAATCTCTTAGACAAGCTCAAGCGCTCTCTTTCTCAAACCCTCTTCCATTTCTATCCTTTGTCTGGACGCCTTGTCACTCACAAAACCCATGATCCACACTCTTATTCCATTTTCGTTGACTGTATCAATAGTGAAGGAGCCAAATTCATCTATGCTACTTTAGATTCGACCATTTCTGACATTCTCTCCCCTGTTGATGTCCCGCCCATTGTTCAATCATTCTTTGATCACCACAAAGCAATTAACCACGATGGTCACACCATGCCTCTGTTGTCTATCCAAGTCACTGAACTATTGGATGGTGTTTTCATAGGTTGTTCCATGAACCACACTATTGGTGATGGGACTGCATATTGGAATTTCTTTAATACGTGGTCTGAGATCTTCCAAGCTCTAGCTAAAGGTCATGAAAATGGTGTTCCTATTTCACACCAACCCATTCACAATCGTTGGTTTCCGTTTAATTGTGGCCCACCACTCAATCTCCCCTTCAAACATCATGACGAGTTTATTGGCAGATACGAAGCACCCTCGCTGAGAGAGAGAATATTCCATTTCTCTGCAGAGTCTATTGCAAAGCTGAAAGCAAAGGCTAACTCAGAGTCCAATACCACCAAAATATCTTCTTTCCAATCCTTGTCAGCACATGTTTGGAGATCCATAACTCGTGCCCGAGGGCTATCCCATGATCAGAGAACAGGTTGCAAGTTGGCCACAAACAATCGAACAAGAATAGAACCACCTGTGCCTCAGGAATATTTCGGAAACTTGATTCATTTAGTGAGTGCAGAAACTACGGCAGGAGAATTGCTTGAGAATGATATAGGATGGGCAGCATGGAAGTTACACCTGGCTGTTGCAAACCATAACTACACAGTGGTTCAGCAAATGGCCAAAGATTGGTTACAGTCTCCTTTTATCCCTCAACTTGGTCGCCTTTTTGAACCCTACTGTGTGCATATGGGTAGCTCTCCCAGATTCAACATGTATGGGAATGAGTTTGGAATGGGGAAAGCGGTAGCACTTAGAAGTGGGTATGCCAACAAATTTGCTGGGAAAGTGACATCATACCCTGGCCGTGAAGGAGGAGGAAGCATAGATTTGGAAGTGTGTCTTTTACCTGATAACATGAGTGCCTTGGAATCAGATGAGGAGTTCATGAATGTAGTTTCTGTGTTCAATCCCTTGTACTAA 1380 0.4341 MSTPAVRPISECFVKPHPERPNMNQICYLSPWDIILVSSHYIQKGLLFKKPASLVNHQDFIQNLLDKLKRSLSQTLFHFYPLSGRLVTHKTHDPHSYSIFVDCINSEGAKFIYATLDSTISDILSPVDVPPIVQSFFDHHKAINHDGHTMPLLSIQVTELLDGVFIGCSMNHTIGDGTAYWNFFNTWSEIFQALAKGHENGVPISHQPIHNRWFPFNCGPPLNLPFKHHDEFIGRYEAPSLRERIFHFSAESIAKLKAKANSESNTTKISSFQSLSAHVWRSITRARGLSHDQRTGCKLATNNRTRIEPPVPQEYFGNLIHLVSAETTAGELLENDIGWAAWKLHLAVANHNYTVVQQMAKDWLQSPFIPQLGRLFEPYCVHMGSSPRFNMYGNEFGMGKAVALRSGYANKFAGKVTSYPGREGGGSIDLEVCLLPDNMSALESDEEFMNVVSVFNPLY* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1507 459 Pfam Transferase family 18 449 - -
Apr5g1507 459 Gene3D - 1 218 IPR023213 -
Apr5g1507 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 452 - -
Apr5g1507 459 Gene3D - 234 444 IPR023213 -
Apr5g1507 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1507 Apr-Chr5 19019594 19021267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1507 12 443 Monolignol Biosynthesis Gene Families AT5G48930 30.131 3.39e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1507 - - gmx:100792511 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1507 5 19019594 19021267 Apr5g1507 5 19019594 19021267 ECH