Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1506 ATGATGGCTACCCCTGTGGTTCACCGTGTTTCAGAATGCTTCATCAAGCCGCAACACTCCCCCGAAGAATCAAACCAAATATGCTATTTAACACCTTGGGATATTGCTAAGTTCTCAACACACTATATCCAGAAGGGTCTGCTCTTCACGAAGCCCTCACCGCTCGTTAATCAACAAGTTTTCATTCAGAATCTATTGAACAAACTAAAACGTGCCCTTTCTCTTACCCTCTTCCATTTCTACCCTTTGGTTGGCCGCTTTGTCACCCTCAAAACCCATGATCCTCCCTTCTATGCTGTTTTTGTTGATTGCAATAACAGTCCCGGAGTTAGATTCATCCATGCAACTTTGGACATGACCATATTCGACATCCTCTCCCCCGTTGATGTCCCACCCATTGTTCACTCATTCTTTGATCACCACAAAGCAGTTAATCACGATGGTCACACCATGCCCTTGATGTCCATCCAAGTCACTGAATTAGTTGATGGTGTTTTCGTAGGTTGTTCCATGAACCACGCTCTTTGTGATGGCACTTCTTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCAAGCTCAATCTCAAGGGCACGAATATGACTTTCCCATTTCACACCCTCCCATTCTCAAACGCTGGTTTCCAGAGGGTTGTGATCCATTAATCAATCTTCCCTTCAAACATCATGATGAGTTTGTTAGTAGATTTGAAGCACCCTTGTTGAGAGAGAGAATATTCCACTTTTCAGAAGAGTCAATTGCAAAGCTAAAAGCAAGGGCCAACTCAGAGTCCAACAGCACCAAAATCTCTTCATTCCAATCCTTGGCAGCACATGTTTGGAGATCCATAACACGTGCTCGTGGACAACCATATGGAAAGAGAATCAGATGCTACTTCACCGCAAACAACAGAACAAGAATGGAACCGCCTCTGCCTCGGGAGTATTTTGGAAACTCAATTCAAGGGTTGGTTGTTGAGACAACGGTAGGGGAATTGCTTGAACATGATTTGGGATGGGCAGCATCAAAGTTGCATTCGGCTGTTGCAAACTATAACGACAAAGCAGTGCAACAAACGGTTAAGGATTGGCTACAGTCTCCTACTGTTCATCAAACACATCTTCTCTATGACCAGTACAGTGTGTTGTTGAGTAGTTCACCCAGGTTCAACATGTACGGGAATGAGTTTGGAATGGGGAAAGCAGTGGCAGTTCTGAGTGGGTATGCCAACAAATTTGACGGAAAAGTGACGTCATTCCAAGGATATGAAGGAGGGGGGAGCATAGATTTCGAAGTGTGTCTTCTGCCAGAAACCATGTGTGAGTTAGAATCAGACAATGAGTTCATGAGTGCTGTTTCTGTGTCTAAGTCCAATCTTGTGTAG 1386 0.4387 MMATPVVHRVSECFIKPQHSPEESNQICYLTPWDIAKFSTHYIQKGLLFTKPSPLVNQQVFIQNLLNKLKRALSLTLFHFYPLVGRFVTLKTHDPPFYAVFVDCNNSPGVRFIHATLDMTIFDILSPVDVPPIVHSFFDHHKAVNHDGHTMPLMSIQVTELVDGVFVGCSMNHALCDGTSYWNFFNTWSEIFQAQSQGHEYDFPISHPPILKRWFPEGCDPLINLPFKHHDEFVSRFEAPLLRERIFHFSEESIAKLKARANSESNSTKISSFQSLAAHVWRSITRARGQPYGKRIRCYFTANNRTRMEPPLPREYFGNSIQGLVVETTVGELLEHDLGWAASKLHSAVANYNDKAVQQTVKDWLQSPTVHQTHLLYDQYSVLLSSSPRFNMYGNEFGMGKAVAVLSGYANKFDGKVTSFQGYEGGGSIDFEVCLLPETMCELESDNEFMSAVSVSKSNLV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1506 461 Pfam Transferase family 14 450 - -
Apr5g1506 461 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
Apr5g1506 461 Gene3D - 231 445 IPR023213 -
Apr5g1506 461 SUPERFAMILY CoA-dependent acyltransferases 42 204 - -
Apr5g1506 461 Gene3D - 10 227 IPR023213 -
Apr5g1506 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1506 Apr-Chr5 19016422 19017943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1506 69 444 Monolignol Biosynthesis Gene Families AT5G48930 27.723 3.12e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1506 - - gmx:100787228 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1506 5 19016422 19017943 Apr5g1506 5 19016422 19017943 ECH