Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1504 ATGATGAGTAGCCGTGCCTTTCGTCGCGTTTCAGAATGCTTCGTCAAGCCACATCGTCCCACCGAAGAGTCAAACCAAATGTGCTATTTAACACCATGGGATATTGCTATGTTGTCTGTACACTACATCCAGAAGGGCCTCCTCTTTAAGAAGCCCACACCACTTGTTAATCATCAAGTTTTCATTCAGAATTTTTTAGACAAGCTCAAGCACTCGCTTTCTCAAACCCTCTTCCATTTCTATCCTTTGTCTGGACGCCTTGTCACCCACAAAACCCATGACCCTCACTCTTATTCCATTTTCGTTGATTGTACTAATAGTGATGGAGCCAAATTCATCTATGCTACTTTAGATTTGAACATTTCTGACATTCTCTCCCCCGTTGATGTCCCACCCATTGTTCAATCATTCTTTGATCACCACAAAGCAATTAACCATGATGGTCACACCATGCCCTTGTTATCCATTCAAGTAACCGAATTATTGGATGGTGTTTTCATAGGCTGTTCCATGAACCATGTTATTGCCGATGGCACTGCTTTTTGGAATTTTTTTAACACATGGTCTGAGATCTTTAATGCTCAAGCTAAAGGGCATGAATATGATGTTCCAATTTCACACCAACCCATTCTCAAACGCTGGTTTCCAGACGGTTGCAATCCATTGATCAATCTTCCATTTAAACATCGTGAGGAATTTATTAGCATATTTGAAGCACCCAAGCTGAGAGAGAGAATATTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAAGCCAACTCCGAGTCCAATACCACCAAAATCTCTTCGTTCCAATCCTTATCAGCACTTGTTTGGAGATCCATAACTCGTGCACGTCGCGTGCCACATGATGAGAGAACAAGGTGCAAGTTGTTCACAAACAACCGAACAAGAATGGAACCCCCTTTGGCACAAGAGTACTTTGGAAACTCACTTAATACAGTTAGTGGAGATGCTACGGCAAGAGAATTGCTCGAGAATGATCTGGGATGGGCAGCTTGGAAGTTGCACCTTGCTGTTACAAACCATAGCCACAAAGCAGTGATGCAGTGGCTCAAAGAGTGGTTACAATCTCCTTTGGTATATCGGTTTGATCGGTTCTTTGATCCCTTCTGTGTGATGATGGCTAGTTCACCGAGGTTCAACATGTATGGGAATGAATTCGGAATGGGAAAAGCGGTAGCTGTTAGGTGTGGGTGTGCCAACAGATCTGATGGGGAAGTTACATCATACCCTGGCCATGAAGGGGGAGGAAGCATCGATTTGGAAGTGTGTCTTTCACCAGATGCAATGAGCGCATTGGAATTGGACGAAGAGTTCATGAATGCAGTTTGCAACTAG 1368 0.4335 MMSSRAFRRVSECFVKPHRPTEESNQMCYLTPWDIAMLSVHYIQKGLLFKKPTPLVNHQVFIQNFLDKLKHSLSQTLFHFYPLSGRLVTHKTHDPHSYSIFVDCTNSDGAKFIYATLDLNISDILSPVDVPPIVQSFFDHHKAINHDGHTMPLLSIQVTELLDGVFIGCSMNHVIADGTAFWNFFNTWSEIFNAQAKGHEYDVPISHQPILKRWFPDGCNPLINLPFKHREEFISIFEAPKLRERIFHFSAESIAKLKAKANSESNTTKISSFQSLSALVWRSITRARRVPHDERTRCKLFTNNRTRMEPPLAQEYFGNSLNTVSGDATARELLENDLGWAAWKLHLAVTNHSHKAVMQWLKEWLQSPLVYRFDRFFDPFCVMMASSPRFNMYGNEFGMGKAVAVRCGCANRSDGEVTSYPGHEGGGSIDLEVCLSPDAMSALELDEEFMNAVCN* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1504 455 Gene3D - 10 225 IPR023213 -
Apr5g1504 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
Apr5g1504 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
Apr5g1504 455 Pfam Transferase family 14 450 - -
Apr5g1504 455 Gene3D - 236 445 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1504 Apr-Chr5 19004746 19008359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1504 64 444 Monolignol Biosynthesis Gene Families AT5G48930 26.942 3.18e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1504 - - gmx:100775661 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1504 5 19004746 19008359 Apr5g1504 5 19004746 19008359 ECH