Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1503 ATGAGTACCTTTGCCGTTCAACGTGTTTCCGAATGCTTCATCAAGCCGCAACACCCCACCAAAGAGTCAAATCAAATATGTTATTTAACACCTTGGGATCTGGCTGCTTTGTCAATAAGCTATATCCAGCATGGCCTGCTCTTCAAGAAGCCCACGAATGTTGCTGATAACCAAGATTCCATCCAAAATCTGTTGGACAAACTCAAACACTCACTTTCTCAGACACTCTTCCATTTCTATCCTTTGGTTGGACGCCTTGTCACCCAGAAAACCCAAGATCCTCCCTCTTATGTTGTATTTGTTGATTGTAGCAACAGTGATGGAGCCAAATTCATCTATGCAACTGTAGATCTGACCATATCTGACATCCTATCCTCCGTTTATGTTCCACCCATTGTCCAATCATTATTTGATCACCACAAAGCAATTAACCATGACGGTCATGCCATGCCCTTGTTGTCCATCCAAGTCACTGAGCTAGTGGACGGTGTTTTCATAGGTTGTTCCATGAACCATGCTGTTGCGGATGGCACTTCTTTTTGGAATTTCTTTAATACGTGGTCTGAGATCTTTCAAGCTCAAGCTCAAGGGCATGAATGCGACTTTCCGATTTCACACCAACCCGTTATCAAACGCTGGTTTCCAGAGGGTTGTGATCCATTAATCAATCTTCCCTTCAAACATCACGACGAGTTTATTAGAAGAGAAGAACCACTCTTGGTGAGAGAGAGAATATTCCACATTTCAGCAGAGTCAATTGCGAAACTGAAAGCAAAGGCCAACTCAGAGTCCAATACCACCCAAATCTCTTCGTTCCAATCATTATCAGCACTTGTTTGGAGATCCATAACTCGTGCGCGCGGACTGCCGCATGAGAAGAGAACATCTTGCAAGTTTGCTATAAACAATCGAACAAGGATGGAACCACCACTGTCTCCGGAATACTTTGGAAACGCAATTGATGGGGTGGGTGCAGAAACGACTGCAGGGGAATTGCTTGAGAATAATCTAGGCTGGGCAGCATGGAAGTTGCACTTGGCTGTTGCAAACTATAACAATACAGTTGCGCAGCAAAAGGTCGAACAGTGGCTGCAGCGTCCTATGATATATCAACTTGGTTGGTCATTTTACTCGTCTAGTGTGACCATGGGTAACTCGCCCAGGTTCAATGTGTATGGGATTGAATTTGGAACTGGGAAAGCAGTGGCCGTTAGAAATGGACATGCCATCAAATTTGATGGGTATGTGTCATCGTACCCTGGTCGTGAAGGAGGGGGAAGCGTGGATTTGGAAGTGTGTCTTTTCCCAGAAAACATGACTGCCCTGGAATCGGACGAGGAGTGGATGAATGCAGTTTCAGTGTCCAATCCCTTGTCCTAA 1380 0.4493 MSTFAVQRVSECFIKPQHPTKESNQICYLTPWDLAALSISYIQHGLLFKKPTNVADNQDSIQNLLDKLKHSLSQTLFHFYPLVGRLVTQKTQDPPSYVVFVDCSNSDGAKFIYATVDLTISDILSSVYVPPIVQSLFDHHKAINHDGHAMPLLSIQVTELVDGVFIGCSMNHAVADGTSFWNFFNTWSEIFQAQAQGHECDFPISHQPVIKRWFPEGCDPLINLPFKHHDEFIRREEPLLVRERIFHISAESIAKLKAKANSESNTTQISSFQSLSALVWRSITRARGLPHEKRTSCKFAINNRTRMEPPLSPEYFGNAIDGVGAETTAGELLENNLGWAAWKLHLAVANYNNTVAQQKVEQWLQRPMIYQLGWSFYSSSVTMGNSPRFNVYGIEFGTGKAVAVRNGHAIKFDGYVSSYPGREGGGSVDLEVCLFPENMTALESDEEWMNAVSVSNPLS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1503 459 Gene3D - 8 224 IPR023213 -
Apr5g1503 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 452 - -
Apr5g1503 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 452 - -
Apr5g1503 459 Pfam Transferase family 6 447 - -
Apr5g1503 459 Gene3D - 233 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1503 Apr-Chr5 19000022 19002884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1503 48 443 Monolignol Biosynthesis Gene Families AT5G48930 28.329 5.41e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1503 - - gmx:100795679 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1503 5 19000022 19002884 Apr5g1503 5 19000022 19002884 ECH