Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1501 ATGGGCAGCATGAAGGTGCATCAGTTAACACGTGGATTCTGGGAGCACGAACCTTTCCTCACGCTTGGGTGCAAGCGCTTACGCCCTCTTGCTCCCAAGCTTCCCAACACCGACAATAACACTTCCACTACCAATCCTTCTGTTCCCTTTGATCTCAAGAGCTTCATCAGGCCAGAAAGTGGCCCCAGAAAACTCGTTTTCTCTGACGATAATAAGAAAGATCCACCTTCACCACAAGGCCAGGTTGAAACGCATCCAGGAGGGACACGGTGGAATCCAACGCAAGAACAGATAGGGATATTGGAGATGTTGTACAAAGGAGGCATGCGAACTCCGAATGCTCAACAGATAGAGCAGATCACGGCTCAACTTGGCAAGTACGGTAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAACAGCCTTAGCTTTTCTCATAGTCCTCGAACTCCCACCATTCACAGTGTTACTTTGGAGACAACGAGGGGGGAAGTAGTAGAGGGAGATAATGAGGAAGATAGTCCGTACAAGAAGAAGTGTAGGAGATGGGTATTTGAGTGCTTGGAAGAACAAAGCAGGTTACAAGGTGAAGAGGAGGAACATAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 684 0.4839 MGSMKVHQLTRGFWEHEPFLTLGCKRLRPLAPKLPNTDNNTSTTNPSVPFDLKSFIRPESGPRKLVFSDDNKKDPPSPQGQVETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLSFSHSPRTPTIHSVTLETTRGEVVEGDNEEDSPYKKKCRRWVFECLEEQSRLQGEEEEHRTLELFPLHPEGR* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1501 227 MobiDBLite consensus disorder prediction 34 50 - -
Apr5g1501 227 MobiDBLite consensus disorder prediction 205 227 - -
Apr5g1501 227 ProSiteProfiles 'Homeobox' domain profile. 84 149 IPR001356 GO:0003677
Apr5g1501 227 CDD homeodomain 89 150 IPR001356 GO:0003677
Apr5g1501 227 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 227 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Apr5g1501 227 Pfam Homeodomain 89 148 IPR001356 GO:0003677
Apr5g1501 227 SUPERFAMILY Homeodomain-like 85 156 IPR009057 -
Apr5g1501 227 SMART HOX_1 86 153 IPR001356 GO:0003677
Apr5g1501 227 Gene3D - 89 154 - -
Apr5g1501 227 MobiDBLite consensus disorder prediction 33 93 - -
Apr5g1501 227 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1501 Apr-Chr5 18988355 18989579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1501 4 155 Wox Gene Family AT1G46480 66.049 1.14e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr5g1501 Homeodomain 4.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1501 - - gmx:100781015 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1501 5 18988355 18989579 Apr5g1501 5 18988355 18989579 ECH