Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1497 ATGCCGAAGAAGAAAAAGCAGTTGGCTTCGTTCATTCATCAACAGTTATTGCTGATACTGTTTCTGCTGTTGCTCGCGTCAGGTGCACTTGCCTCAAAACTCGCACGCCGTCATCTTCCGCCGTTAGTTTTCGCGGACGCCAGCGCCCTACTTGCGTTCAAAGTAAAAGCCGACGTGAACAAACACCTAGACTTCTCCCCAACCACGCGCGGCCTCCGGTTCTGCGCGTGGGAGGGCGTGGAATGTAACGGAGCCAAAGTGGTGCGTCTCGTGCTGCAAGGCTTAGATCTCGGAGGCGTTTGGGCTCCCAACACACTGTCACGTCTCGACCAACTCCGAGTCCTTAGTTTGCAAAACAACTCCCTCATCGGACCCATACCGGACCTCACCGGTCTCTTCAATCTCAAAAGTCTTTTTCTCGATAACAACCACTTCATCGGTTCCCTCCCTCCCTCACTCTTCATCCTTCACCGCCTTCGAACCTTGGATTTCTCTCACAATAACCTCACCGGATCAATCTCCACCGCTTTCACCAACCTTGACCGCCTTCACTGCCTCCGTCTTAGCTGGAACCACTTCAACGGTTCCATTCCTCCGTTTAACCAGTCTTCTCTCCGAATCTTTGACGTTTCCGGCAACAACCTCTCCGGCGCCATTCCGGTCACTCCCGCACTGTTCCGTTTTCAGGCTTCTTCCTTCGCTTTCAACCCTGGCCTCTGCGGCGAAATCATCCGCAAAGAATGCCGTCCAGCGGAGCCTTTCTTCGGACCTTCCTCGCCGCCAGCGGCGGGGCTCGGCCAGAGCGCGCAGGTCCACGGCGTCAACGGCTTGATCCGGCAGCCGTACGAGAAGAAGCGCCGCGACCGGAGGGCGATGATAATCGGATTCTCGGCCGGAGTATTCGTTCTGATAGTTTCGCTGGTGTGCTTCGCGGCGGCGGTGAGGAAGCAGAGGTGTCGGAGCAAGAAGGAAGGTTGTTCGGGGATGATGGCGTCGGATGCGGCGGCGACGGCGGAGGCAGCGGCGGTGATGCAGATGGAGTTGGAGAGGGAGTTGGAGGAGAAGGTGAAGAGGGCGGAGGTGGCGAAGAGTGGGAGTTTGGTATTCTGTGCGGGTGAGGCGCAGGTGTATACGCTGGAGCAGCTGATGAAGGGTTCTGCTGAGTTGTTAGGAAGAGGGTGTCTGGGAACTACTTACAAGGCAGTTTTGGATAACCGTCTAATTGTAACGGTGAAACGACTTGATGCAACGAAAATGGCTGCGCATGCGACTAAGGAAGTGTTCGAGAGACACATGGAAGCAGTGGGTGGGCTTCGACACCCCAATTTGATTGCACTTAGGGCATACTTTCAGGCCAAGCAAGAGAGACTCATTATCTATGATTTCCAGCCCAATGGCAGCCTCTTCTCCCTCATACACGGTTCGAGATCAAGCAGGGCAAGGCCATTGCACTGGACATCATGCTTAAAAATAGCTGAGGACGTAGCACAAGGGCTGTCCTTCATACACCAGGCATGGAGACTGGTCCACGGCAATCTCAAGTCTTCCAATGTTCTCCTTGGACCTGATTTCGAGGCATGCCTCACTGACTACTGCCTGTCGGTGTTGACCCACCCAGCCATTTTTGATGAAGATGGCGATTCAGCAGCCTACAGGGCTCCAGAGACTCGAAACCCAAATCACCACCCAACCCACAAATCTGATGTTTATGCCTATGGGATTTTATTGCTAGAGCTTCTGACGGGGAAATATCCTTCCGAGCTTCCATTCTTGGTTCCTGGTGACATGTCCGGTTGGGTGAGGTCCATCAGGGATGACAATGGGGGTGATGACAGCCGAATGGACATGCTTCTTCAGGTGGCTACAACCTGCAGCTTGACCTCGCCTGAGCAGAGACCCACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATCAAAGATATTGTACTATTGGAGGATAGTAGTGAATTGGACCTACGCAGTAGTAATGCGATGCACTAA 2001 0.5367 MPKKKKQLASFIHQQLLLILFLLLLASGALASKLARRHLPPLVFADASALLAFKVKADVNKHLDFSPTTRGLRFCAWEGVECNGAKVVRLVLQGLDLGGVWAPNTLSRLDQLRVLSLQNNSLIGPIPDLTGLFNLKSLFLDNNHFIGSLPPSLFILHRLRTLDFSHNNLTGSISTAFTNLDRLHCLRLSWNHFNGSIPPFNQSSLRIFDVSGNNLSGAIPVTPALFRFQASSFAFNPGLCGEIIRKECRPAEPFFGPSSPPAAGLGQSAQVHGVNGLIRQPYEKKRRDRRAMIIGFSAGVFVLIVSLVCFAAAVRKQRCRSKKEGCSGMMASDAAATAEAAAVMQMELERELEEKVKRAEVAKSGSLVFCAGEAQVYTLEQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDATKMAAHATKEVFERHMEAVGGLRHPNLIALRAYFQAKQERLIIYDFQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLSFIHQAWRLVHGNLKSSNVLLGPDFEACLTDYCLSVLTHPAIFDEDGDSAAYRAPETRNPNHHPTHKSDVYAYGILLLELLTGKYPSELPFLVPGDMSGWVRSIRDDNGGDDSRMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKDIVLLEDSSELDLRSSNAMH* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1497 666 SUPERFAMILY Protein kinase-like (PK-like) 388 643 IPR011009 -
Apr5g1497 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 654 - -
Apr5g1497 666 Gene3D Transferase(Phosphotransferase) domain 1 464 657 - -
Apr5g1497 666 ProSiteProfiles Protein kinase domain profile. 384 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1497 666 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 17 654 - -
Apr5g1497 666 Gene3D Ribonuclease Inhibitor 202 250 IPR032675 -
Apr5g1497 666 Gene3D Ribonuclease Inhibitor 44 201 IPR032675 -
Apr5g1497 666 Gene3D Phosphorylase Kinase; domain 1 350 462 - -
Apr5g1497 666 Pfam Protein kinase domain 388 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1497 666 Pfam Leucine rich repeat 134 193 IPR001611 GO:0005515
Apr5g1497 666 SUPERFAMILY L domain-like 45 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1497 Apr-Chr5 18931982 18935811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1497 46 664 Receptor kinase-like Gene Family AT5G43020 56.132 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr5g1497 Pkinase 2.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1497 - - gmx:100817172 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1497 5 18931982 18935811 Apr5g1497 5 18931982 18935811 ECH