Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1489 ATGCACATGCTAATCTTCTTCCTCCTTTTCATTTTTGCCTCAATTTCATTTGCTTTTGCGGTGACAGACACACTACCAGAAAGATCTTCACTTTCGGTAGAGAAACCAAGCGAAACGCTGGTTTCAGCCAATGGAGACTTCTCCGCTGGCTTCTTTCAAGTCGGAAACAACGCCTTTTGCTTCTCCGTGTGGTTCACAAGGTCCAAACCACCCACCGTTACATGGATGGCAAATCGCGACGAACCCGTCAACGGCAAAGGCTCAAAACTCTCACTTTGGAAGAACGGCAACCTCGTTTTGATCGACGCAGAAAGAACCACTATCTGGACCACCGGTACCTGCTCCCCCTTCGAATCACATCTGAAACTGCTTAACAACGGCAACCTCATACTCCTCACTTCACAATCCACTATCGTTTGGCAAAGCTTTGATTCTCCAACAGATACCCTTCTTCCTGGCCAAGCAGTAACAGAACAAGCAAGCCTTGTTTCATCAAGAAGCACAACAAACTATTCCTCTGGTTTCTATAAACTTTACTTCGACAACGACAACGTTCTTCGTTTGCTTTACAAGGGTGCTACTTTGTCTAGCGTGTACTGGCCAGAAACGTGGAAGCTTCCAATCGATAATGGGAGGTCCACTTACAATGTAAGCAAAACCGCTGTGTTGGATTCCTTTGGACAGTTCTCGTCTTCTGATGGGTTTACAATCCGTTCTGCGGATTATCCAAGGATAGTGCATAGACGACTCAAGATGGATCCTGATGGTAACTTGCGTGTGTATAGCTTCAACGAGGAGCATGAGATATGGGAGGTGTCATGGCAAGTCATTTCCCAACCATGTACTGTTCATGGCATTTGTGGAGCTAACAGCTTGTGCACTTATCATCCTGTTTTGGGAAGGACTTGCTATTGCTTGCAAGGATTTAAGGTGAAGGATCCTAATGATTGGACTCAGGGTTGCGAGCCTGAGTTTAGTCCTTCTTATTTTTCTTGCAACAGAAAGGAGTCTATGGATTTTCTCCATCTTAAAACTACGGAATTGTTTGGCTATGACTTCAATGTGACCGCCGTTACAAGCTTGAAGGAGTGCCAAAATCTGTGCTTGGAACTTTGTGATAAATGTCGGGGTGTGCAATTCAAGTTCAATGGAATTAATACTTATAATTGTTACCCCAAAACAATACTACTCAATGGACGGGACAGCCCAAATTTCGACGGAGAGATGTATCTAAAATTGCCAAAAGTGACTCTTCTCTCTTCTAGCGAGCCTCTTAAGCATTCGTTCATGAATTGTTCCGTTGGTTTGTCCCAACGTCTGGATAGATTTTATCAATTGCCTAGAAGAAACTCCACGTTGAGTTTCTTGGTTTGGTTTGCTTGCGGGATTGGGGCCTTTGAGGTGTCAAGCATTTTCCTTGTGTGGTTCTTCTTGTTTAGAACAAACAAGCAACCTGATAAAATGGATCAACAACAGCACCTCCTTTCTGCCACGGGATTTCAAAGGTTCGCCTATGCAGAACTCAAAAGCGCGACGAATGGATTCAGAGAGGAGGTTGGAAGAGGAGCGGGAGGGATTGTGTACAAAGGGACTTTATGTGATCAACGTGTTGCGGCTATTAAGCGCTTAAGCGAAGCTAATCAAGGAGAAGCTGAGTTCCTGGCTGAAATAAGCACGATTGGCATGTTGAACCACATGAATTTGATTGACATGTGGGGGTACTGCGTTGAAGGGAAGCACAGGCTCTTGGTGTATGAGTATATGGAGCATGGATCCTTAGCAAACAATCTCTTTGCTAATGCACTTGATTGGAAGAAGAGGTTTAACGTTGCTGTGGGTACGGCCAAAGGTTTGGCTTATTTACATGAAGAGTGTTTGGAGTGGATTTTGCATTGCGACGTGAAGCCTCAAAACATTCTCCTTGACTCTGAATTCCAACCCAAGGTAGCAGATTTTGGGTTGTCGAAACTTTTGAATAGAGATGAGCGTGGAAGTTCTAATTTTTCAAGAATAAGAGGAACACGGGGTTACATGGCTCCGGAGTGGGTTTACAATCTTCGCATTACTTCTAAGGTGGATGTTTATAGTTATGGGATTGTGGTGTTGGAAATGGTAACTGGAAGAAGTCCTATGGAAATCCATAGCCTTGAGAACAGTAAAGGCATAGAGCAGCGAAGGTTGGTGACGTGGGTAACAGATAAGATAAACATTGCACCAACGAGTGAGTTTTGGATTGAGGAGATAGCTGATCCCAACTTGGAAGGCCAATACAATGTTTCAGAAGTTGAGATTTTGGTTAAAGTGGCTTTGCAATGTGTTAAAGACGACATGAATGAAAGACCGACAATGAGCCAAGTAGCGGAGATGCTTCAGTCCCATGAAAGAAAATGA 2391 0.44 MHMLIFFLLFIFASISFAFAVTDTLPERSSLSVEKPSETLVSANGDFSAGFFQVGNNAFCFSVWFTRSKPPTVTWMANRDEPVNGKGSKLSLWKNGNLVLIDAERTTIWTTGTCSPFESHLKLLNNGNLILLTSQSTIVWQSFDSPTDTLLPGQAVTEQASLVSSRSTTNYSSGFYKLYFDNDNVLRLLYKGATLSSVYWPETWKLPIDNGRSTYNVSKTAVLDSFGQFSSSDGFTIRSADYPRIVHRRLKMDPDGNLRVYSFNEEHEIWEVSWQVISQPCTVHGICGANSLCTYHPVLGRTCYCLQGFKVKDPNDWTQGCEPEFSPSYFSCNRKESMDFLHLKTTELFGYDFNVTAVTSLKECQNLCLELCDKCRGVQFKFNGINTYNCYPKTILLNGRDSPNFDGEMYLKLPKVTLLSSSEPLKHSFMNCSVGLSQRLDRFYQLPRRNSTLSFLVWFACGIGAFEVSSIFLVWFFLFRTNKQPDKMDQQQHLLSATGFQRFAYAELKSATNGFREEVGRGAGGIVYKGTLCDQRVAAIKRLSEANQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLANNLFANALDWKKRFNVAVGTAKGLAYLHEECLEWILHCDVKPQNILLDSEFQPKVADFGLSKLLNRDERGSSNFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMVTGRSPMEIHSLENSKGIEQRRLVTWVTDKINIAPTSEFWIEEIADPNLEGQYNVSEVEILVKVALQCVKDDMNERPTMSQVAEMLQSHERK* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1489 796 Pfam D-mannose binding lectin 72 159 IPR001480 -
Apr5g1489 796 SUPERFAMILY Protein kinase-like (PK-like) 488 790 IPR011009 -
Apr5g1489 796 ProSiteProfiles Protein kinase domain profile. 513 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1489 796 CDD PAN_AP_plant 331 414 - -
Apr5g1489 796 Gene3D - 15 144 IPR036426 -
Apr5g1489 796 Pfam S-locus glycoprotein domain 246 312 IPR000858 GO:0048544
Apr5g1489 796 SMART blect_4 31 146 IPR001480 -
Apr5g1489 796 PIRSF SRK 1 796 IPR024171 GO:0004674
Apr5g1489 796 PANTHER OS07G0415500 PROTEIN 4 795 - -
Apr5g1489 796 Gene3D Transferase(Phosphotransferase) domain 1 588 796 - -
Apr5g1489 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 201 IPR036426 -
Apr5g1489 796 Pfam Protein kinase domain 517 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1489 796 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Apr5g1489 796 Gene3D Phosphorylase Kinase; domain 1 478 587 - -
Apr5g1489 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Apr5g1489 796 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Apr5g1489 796 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 4 795 - -
Apr5g1489 796 CDD STKc_IRAK 519 791 - -
Apr5g1489 796 ProSiteProfiles PAN/Apple domain profile. 332 414 IPR003609 -
Apr5g1489 796 Gene3D - 147 284 - -
Apr5g1489 796 SMART serkin_6 513 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1489 Apr-Chr5 18857879 18861348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1489 469 791 Receptor kinase-like Gene Family AT1G60800 40.120 2.03e-67 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr5g1489 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1489 - - gmx:100816469 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1489 5 18857879 18861348 Apr5g1489 5 18857879 18861348 ECH