Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1488 ATGGCTGTAACATACCCCTTGTCGTTGATCCTCCTCTCTCTTGTTTTCTCTATACATCTTTCATCTTCAGAAATCGAAACTATGCGTCAAGGTTCATCCCTCTCAGTGGATAATCCAAACGACGTCATGCTCTCACCAAACGGCATGTTCTCCGCCGGCTTCTATGCCGTTGGCGAAAACGCATATTCCTTCGCCATTTGGTTTTCCGAACCCCATCCCCAAACACGAAACCCCACCGTCGTATGGATGGCAAACCGTGACCAGCCTGTAAACGGCAAGCGCTCAACGGTATCCCTTCTTCACAGCGGCAATCTCGTCTTAAACGACGCCGATAACTCCCACGTTTGGTCAACAGACACCGTTTCACTGTCCTCCTCTGTGCACCTGCTTCTTAACGACACCGGCAACCTCGTTTTACTTGAAGAGGATGACGGCGTCGTTTTGTGGCAAAGCTTTGATTTCCCTACAGATACCCTTCTACCTCAACAAGTGCTCACCAGATACGCAAAACTAATATCTTCTAGAAGCAACACTAACAAGTCCTCGGGTTTTTACACCCTTTTCTTCGACAACGATAACATTCTTCGTCTTCTCTACGATGGTCCTGAAGTTTCAGGCCTTTACTGGCCAGATCCTTGGTTTAACAATTGGGAGGCTAATAGGGCTGGTTACAATAATAGCAGAGTTGCAGTGATGGATACTCTTGGCAATTTCAGTTCTTCAGATGATTTCAATTTCATGACTACTGATTATGGCACCGTCATACAAAGAAGATTCACCCTGGATCACGATGGGAACATTCGTGTTTATAGTCGGAGATTAAGTGGAGAAGAATGGTCTGTTTCATGGCAAGCCAAAGCAAGACCATGTAGCATTCATGGTATTTGTGGCCCCAATAGTTTATGCACTTATAATCATGATCGTGGTTTGAATTGTTCGTGCCTTCCGGGGTATAAGATGATGAATGTTGGTGATTGGTCTTATGGCTGTGAACCGAAATTCACTGCGTCTTGCAACGTAACCGAGTCTCGGTTTTTGTATATAAGCAACGTGGAGTTGTATGGCTATGACTATGGGATCATGGAAAACTATACGCTTAAGCAGTGTAAGGACTTGTGCCTGCAGTTATGCAACTGTCAAGGGATACAATATACCTATGTATTTGGGCCCAACACTTATACATGTTATCCGAAGTTGCAGTTGCAGAATGCTTATCGTACACCGTATTTTAATGCTGATCTGTACTTGAAACTCCCAGCAAACAGTTCATATTCTTTTGATGACGTAGATGATTACAGTCTTGATTGTTCTTCGAGTTCGAGAACGATGCAGCTAGAGAGAGCATATGAGAAGGGTCATGGAAACAGATATTTAAAGTTCTTGATCTGGTTTGCAGGGGGAGTGGGAGGGCTTGAGGTTTTGTGTATATTTCTGGTTTGGTTTTTTCTGGTGAGAACCAGGCAACCATATTCTGGTGCAGATCAACGAATCTATAATTTGGCAATGAATGGTTTTAAAAAATTCAGTTATTCTGAGCTGAAACAAGCCACCAGAGGCTTTAGCCAAGAGATAGGAAGGGGTGCAGCAGGGACTGTATACAAAGGTGTGTTGTCTGATCAACGAGTTGCAGCAGTGAAGAGACTCAAGGATGCTAATCAAGGAGAAGAAGAGTTCCTCGCAGAAGTAAGCAGCATTGGAAGGCTTAACCACATGAATTTGATTGAGATGTGGGGGTATTGTGCTGAGGGCAAGCACAGGCTTCTGGTGTATGAGTTCATGGAGCATGGCTCTCTAGCAGAAAATATCAAGTCTAATGAGTTGGACTGGGCCAAAAGGTTTGATATAGCCTTAGGAACAGCAAAGGGTTTGGCTTATATCCATGAGGAGTGTTTGGAGTGGATTTTGCATTGTGATGTGAAGCCCCAAAACATACTTTTGGATTCCACCTATCAACCCAAGGTAGCAGATTTTGGGCTGTCCAAGCTGCGGAACAGAAATGATACTAAATACTCCAGTTTTTCAAGGATACGAGGAACCAGGGGTTACATGGCTCCTGAATGGGTTTTCAATCTACAAATCACCTCCAAAGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGATCACAGGAAAGAGCGCAACAAAGGATGTTGATGCAACTACTGATGATGGAGTAGAGAAGCAGCGTTTCAGCCTGATCACGTGGCTTAGACAGAAACAGAATGAAGGATCTCGGTGGGTTAATGAAATCTTAGACCCCACCATAGAAGGAGGTTATGACGAGGGTAAGATGGAAGCTTTGGCTAGAGTAGCTCTGCAATGTGTGGAGGAAGAGAAGGACAAGAGACCCACCATGAGCCAAGTAATAGAGGTGCTTCAGAAATGTAGCCGCGAAAATGATAATCAGTGA 2415 0.441 MAVTYPLSLILLSLVFSIHLSSSEIETMRQGSSLSVDNPNDVMLSPNGMFSAGFYAVGENAYSFAIWFSEPHPQTRNPTVVWMANRDQPVNGKRSTVSLLHSGNLVLNDADNSHVWSTDTVSLSSSVHLLLNDTGNLVLLEEDDGVVLWQSFDFPTDTLLPQQVLTRYAKLISSRSNTNKSSGFYTLFFDNDNILRLLYDGPEVSGLYWPDPWFNNWEANRAGYNNSRVAVMDTLGNFSSSDDFNFMTTDYGTVIQRRFTLDHDGNIRVYSRRLSGEEWSVSWQAKARPCSIHGICGPNSLCTYNHDRGLNCSCLPGYKMMNVGDWSYGCEPKFTASCNVTESRFLYISNVELYGYDYGIMENYTLKQCKDLCLQLCNCQGIQYTYVFGPNTYTCYPKLQLQNAYRTPYFNADLYLKLPANSSYSFDDVDDYSLDCSSSSRTMQLERAYEKGHGNRYLKFLIWFAGGVGGLEVLCIFLVWFFLVRTRQPYSGADQRIYNLAMNGFKKFSYSELKQATRGFSQEIGRGAAGTVYKGVLSDQRVAAVKRLKDANQGEEEFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEFMEHGSLAENIKSNELDWAKRFDIALGTAKGLAYIHEECLEWILHCDVKPQNILLDSTYQPKVADFGLSKLRNRNDTKYSSFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGKSATKDVDATTDDGVEKQRFSLITWLRQKQNEGSRWVNEILDPTIEGGYDEGKMEALARVALQCVEEEKDKRPTMSQVIEVLQKCSRENDNQ* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1488 804 CDD STKc_IRAK 524 796 - -
Apr5g1488 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 799 - -
Apr5g1488 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Apr5g1488 804 CDD B_lectin 44 155 IPR001480 -
Apr5g1488 804 Pfam D-mannose binding lectin 79 167 IPR001480 -
Apr5g1488 804 Gene3D - 154 281 IPR036426 -
Apr5g1488 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 212 IPR036426 -
Apr5g1488 804 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 6 799 - -
Apr5g1488 804 Pfam S-locus glycoprotein domain 248 321 IPR000858 GO:0048544
Apr5g1488 804 SMART ntp_6 340 418 IPR003609 -
Apr5g1488 804 ProSiteProfiles Bulb-type lectin domain profile. 19 152 IPR001480 -
Apr5g1488 804 SUPERFAMILY Protein kinase-like (PK-like) 499 794 IPR011009 -
Apr5g1488 804 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1488 804 CDD PAN_AP_plant 337 419 - -
Apr5g1488 804 Gene3D Phosphorylase Kinase; domain 1 486 592 - -
Apr5g1488 804 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Apr5g1488 804 SMART blect_4 34 155 IPR001480 -
Apr5g1488 804 Gene3D - 21 153 IPR036426 -
Apr5g1488 804 Gene3D Transferase(Phosphotransferase) domain 1 593 804 - -
Apr5g1488 804 SMART serkin_6 518 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1488 804 Pfam Protein kinase domain 521 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1488 804 PIRSF SRK 1 804 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1488 Apr-Chr5 18848558 18850972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1488 495 799 Receptor kinase-like Gene Family AT3G58690 39.241 1.73e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr5g1488 Pkinase 1.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1488 - - gmx:100792388 1237.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1488 5 18848558 18850972 Apr5g1488 5 18848558 18850972 ECH