Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1482 ATGGAGACTGGAGTTCCAAAGAGAAGGGCCAACCAATCCCAAACTCAACCCCTCAAAAAACAAAGAGTTGTTTTGGGTGAACTTTCCAATTTGCCCAATCTCATTGTTCCTCAACCTAAACCCCTCAATAAAGCACCCACCACTAACAAGAATTTGAACAAAACTGTTGACAATGTTGTTGATTCAAAATCAAACATCAATGGCCTTGTTGTTTCCGAGATCTATAAATATCTTCGCAAGTTGGAGATGGAGATGCGAAGAACAGTGTTTGACTACATTGAGAGAGTTCAGACAGAGGTTACTACTAACATGAGAGGAATATTGGTGGATTGGTTAGTAGAGGTTGCGGAAGAGTACAAGCTTCTTTCGGATACCCTTCATCTTGCGGTTTCGTATATTGATCGGTTTTTATCGGTTAATCCAGTGAGTAAACCAAAGCTTCAGTTGCTGGGTGTTTCCTCCATGCTTATTGCATCGAAATATGAAGAAATTAATCCACCCCACGTGGAAGAGTTCTGTTTCATCACTGATAACTCATATAACAAAGCAGAGGTGGTAAGTATGGAAGCTGACATACTCAAGTCCCTAAATTTTGAACTGGGCAACCCCACTGTTAAGACATTTTTAAGGAGGTTTACTGGGATTGCTTGTGAGAATAAAAAGGCTCCAAATTTGCAGTTTGAGTTTATGAGTTACTATCTTGCCGAGCTAAGTTTGTTGGACTATTATTGTTTGAGGTTCTTGCCTTCTTTGGTGGCTGCATCTGTAATATTTCTTGCTAGATTTATCATTTGGCCTGAACTTCAACCTTGGACATCAGCTCTGTGTGAATGCTCTGGGTATAAATCAGTTGACTTAAAAGAGTGTGTTCTCATCTTGCATGACTTGTACATGGCAAGGAGGGGTGGGTCTTTCCAAGCTACAAGGGAGAAATACAAGCAACACAAGTTTAAACACGTAACGAACCTGCCTGCGCCTCGACATGTACCTTTTTATCTCTTTGAGCAATAG 1011 0.4065 METGVPKRRANQSQTQPLKKQRVVLGELSNLPNLIVPQPKPLNKAPTTNKNLNKTVDNVVDSKSNINGLVVSEIYKYLRKLEMEMRRTVFDYIERVQTEVTTNMRGILVDWLVEVAEEYKLLSDTLHLAVSYIDRFLSVNPVSKPKLQLLGVSSMLIASKYEEINPPHVEEFCFITDNSYNKAEVVSMEADILKSLNFELGNPTVKTFLRRFTGIACENKKAPNLQFEFMSYYLAELSLLDYYCLRFLPSLVAASVIFLARFIIWPELQPWTSALCECSGYKSVDLKECVLILHDLYMARRGGSFQATREKYKQHKFKHVTNLPAPRHVPFYLFEQ* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1482 336 SUPERFAMILY Cyclin-like 203 328 IPR036915 -
Apr5g1482 336 SMART cyclin_7 110 194 IPR013763 -
Apr5g1482 336 SMART cyclin_7 207 295 IPR013763 -
Apr5g1482 336 SMART Cyclin_C_2 203 326 IPR004367 -
Apr5g1482 336 SUPERFAMILY Cyclin-like 68 200 IPR036915 -
Apr5g1482 336 CDD CYCLIN 104 193 IPR013763 -
Apr5g1482 336 PANTHER CYCLIN-A3-1-RELATED 16 335 - -
Apr5g1482 336 Pfam Cyclin, N-terminal domain 73 200 IPR006671 -
Apr5g1482 336 Gene3D - 73 322 - -
Apr5g1482 336 CDD CYCLIN 203 294 IPR013763 -
Apr5g1482 336 Pfam Cyclin, C-terminal domain 203 325 IPR004367 -
Apr5g1482 336 Gene3D - 87 201 - -
Apr5g1482 336 PIRSF Cyclin_A_B_D_E 5 330 IPR039361 -
Apr5g1482 336 ProSitePatterns Cyclins signature. 105 136 IPR006671 -
Apr5g1482 336 PANTHER CYCLINS 16 335 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1482 Apr-Chr5 18811600 18813248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1482 1 335 Core Cell Cycle Gene Families AT5G43080 55.233 1.22e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1482 K06627 - gmx:100776007 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1482 5 18811600 18813248 Apr5g1482 5 18811600 18813248 ECH