Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1460 ATGGATGATGATCTTTCTACCAGCCTTATTTGCCAAGAAAGCGAAACGTGCTTGGAAGAAGAACAGTCGTTTGTTGAATCATGGAGGGATTGTGGTGTTTCAGAGGAGGAGCATGCGGGTATTTTGATTGAGAGAGAGAGAGTTTTTGGGTTCAAAAGGGACGAGACTTTGGTGTTTGGGGACTGGGAGAAACGTGCCCGCATGGATGCAATCAATTGGATTCTCAAAACAAGAGCAACATTTGGTTTTCGCTTGGAAACGGCTTATTTGTCGGTCACTTACTTCGATCGGTTCCTTTCCAGAAGGTCTATTGATAGTGACAAGTATTGGGCAATTCGGTTACTGTCAATTGCATGTCTTTCTCTCGCTGCAAAGATGGAGGAATGCAATGTGCCGGGGCTATCACAGTTTCGATTGGAAGATTATTCCTTTGAGGGAAGAGTTATTCGAAAAATGGAGCTTTTGGTGCTGAGCACATTGGAGTGGAAAATGGGTATCATCACTCCCTTTCATTTTCTTTCTTATTTCATCACAAAGTTCTCCAACCAATCCCCATCAAGTCCTATTGTTTCCGAGACCATGCAACTCATCTTGACCACAATGGAAGAGGTTAATTTAATGGATCACAAACCATCTGTTATTGCTGCGGCTGCTAGTTTGGTGGCAATGGAAAAAAAATTGACGATAGAAGCAGTCGAGTTGAAGATGAGTTCAATTCCTCAACACAGCTTTCTTCAACCTAAAGATGTATTTGAGTACTATAATCTAATTCAAAGATTATACGAGGAGAAAACCAGAAGAAACATGATGCTACATACGCCAATTATAATGACAGAGAGTTCACGAGTCACCTCTGATCCAATGGCAAAGAGAAGAAGACTCACTTTCAGTGATGATGAAGGAAGTAGTGATGGGAAGGGGCTCCATTAG 930 0.4194 MDDDLSTSLICQESETCLEEEQSFVESWRDCGVSEEEHAGILIERERVFGFKRDETLVFGDWEKRARMDAINWILKTRATFGFRLETAYLSVTYFDRFLSRRSIDSDKYWAIRLLSIACLSLAAKMEECNVPGLSQFRLEDYSFEGRVIRKMELLVLSTLEWKMGIITPFHFLSYFITKFSNQSPSSPIVSETMQLILTTMEEVNLMDHKPSVIAAAASLVAMEKKLTIEAVELKMSSIPQHSFLQPKDVFEYYNLIQRLYEEKTRRNMMLHTPIIMTESSRVTSDPMAKRRRLTFSDDEGSSDGKGLH* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1460 309 Gene3D - 59 159 - -
Apr5g1460 309 SUPERFAMILY Cyclin-like 27 164 IPR036915 -
Apr5g1460 309 SMART cyclin_7 72 158 IPR013763 -
Apr5g1460 309 Gene3D - 160 273 - -
Apr5g1460 309 Pfam Cyclin, C-terminal domain 167 264 IPR004367 -
Apr5g1460 309 ProSitePatterns Cyclins signature. 67 98 IPR006671 -
Apr5g1460 309 Pfam Cyclin, N-terminal domain 63 164 IPR006671 -
Apr5g1460 309 SUPERFAMILY Cyclin-like 149 239 IPR036915 -
Apr5g1460 309 PANTHER CYCLINS 40 268 IPR039361 -
Apr5g1460 309 CDD CYCLIN 67 157 IPR013763 -
Apr5g1460 309 SMART Cyclin_C_2 167 289 IPR004367 -
Apr5g1460 309 PANTHER CYCLIN-D5-1 40 268 - -
Apr5g1460 309 MobiDBLite consensus disorder prediction 282 309 - -
Apr5g1460 309 MobiDBLite consensus disorder prediction 285 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1460 Apr-Chr5 18654449 18657017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1460 9 239 Core Cell Cycle Gene Families AT4G37630 40.161 6.80e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1460 K18811 - gmx:100780266 472.241