Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1441 ATGTTCTTCATCGAAGACGAAGCGGTTCAATGTCCACCGGTTCTCGAAACCATGTTGACCCAAAGTGAAATACAAGACCTCTTTTCCCTCATTAACCAACCGGAAGAACCGGTCAGCCCAGGCTCCGGTTCACAGGGATCGAACCGGGCGGTTTACTCGTCAGAAGAAAGAAAGCTGAGGCGCATGGAGTCGAACCGGGAATCGGCACGACGCTCCCGCTACCGAAAGAAGAAGCATTTAGAGAACCTCACGACCCAACTGAACCGGTTGAGAATAGAAAACCGGGAACTTAAAAACCGGCTTGCCCTCACCCTGCATCACCATCTCCTATTATCCCTTCACAATGATCATCTAAAATCCGAATCCGTTGCCCTTATGGCCTCACTTTCGGATCTATATGGATATTTAGGCACCATGCTTTCACAATAA 429 0.4895 MFFIEDEAVQCPPVLETMLTQSEIQDLFSLINQPEEPVSPGSGSQGSNRAVYSSEERKLRRMESNRESARRSRYRKKKHLENLTTQLNRLRIENRELKNRLALTLHHHLLLSLHNDHLKSESVALMASLSDLYGYLGTMLSQ* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1441 142 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Apr5g1441 142 Gene3D - 55 107 - -
Apr5g1441 142 SMART brlzneu 53 124 IPR004827 GO:0003700|GO:0006355
Apr5g1441 142 Coils Coil 52 72 - -
Apr5g1441 142 Coils Coil 80 100 - -
Apr5g1441 142 MobiDBLite consensus disorder prediction 53 70 - -
Apr5g1441 142 PANTHER BZIP TRANSCRIPTION FACTOR 20 141 - -
Apr5g1441 142 MobiDBLite consensus disorder prediction 33 77 - -
Apr5g1441 142 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 102 IPR004827 GO:0003700|GO:0006355
Apr5g1441 142 Pfam bZIP transcription factor 56 101 IPR004827 GO:0003700|GO:0006355
Apr5g1441 142 SUPERFAMILY Leucine zipper domain 57 111 IPR046347 GO:0003700|GO:0006355
Apr5g1441 142 CDD bZIP_plant_GBF1 58 100 IPR045314 GO:0003700|GO:0006355
Apr5g1441 142 PANTHER BZIP TRANSCRIPTION FACTOR 44 20 141 - -
Apr5g1441 142 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1441 Apr-Chr5 18505429 18505857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1441 13 118 bZIP Transcription Factor Family AT3G49760 40.708 1.03e-19 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g1441 bZIP_1 4.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1441 - - gmx:102661984 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0349 9 4689621 4690052 Apr5g1441 5 18505429 18505857 PCT