Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1416 ATGGGTATCTGCATATCCGCTGAATCTTCAGTGATTCATGGGGCGCCTGAAGAAGCTCGGGATGAAAATGTAACAGTGTTTAAAGCAAGCAATGTTCTAAGTGGGTCTGAGGGACTTTGCTCCGTTTACTCTAAACAAGGTAGCAAAGGACTCAACCAAGATGCTGCTACACTTTGTCAGGATTACGGGACGGAAGACGCAGCATTTTGTGGAGTTTTTGATGGGCATGGAAGGAATGGTCACATGGTGAGCAAAATAGTAAACACCCGTTTGTCTTCACTCATACTGAACCAAAAGAATCCAAATGTGAAGGTTGATACAGTAGAAGATGATTGGGGTTCAAACAGGAATTTTAAAGAATGGAAAGAAGCTATTACTTGTGCTTTCGGGGTGATGGACAAGGAGGTGAAACTACAAGAGAATATAGACAGCTCTTGCAGTGGAACTACGGCTGTTGTTGTCATAAAACAGGGTGAAGATCTTGTGATAGCTAACCTTGGCGACTCAAGAGCAGTCTTGGGGACAGTCTCTGACGGTGAAATCATACCTATTCAATTGACCACGGATATGAAACCGGGATTACCTCGCGAAGCCGATCGAATAAGAAGTTGCAACGGTCGTGTATTTGCTCTTAGGGAAGAACCACACATCCAACGAGTGTGGTTACCCAATGAGAACTCCCCAGGCCTAGCCATGTCTCGAGCTTTTGGAGATTTCATGCTAAAAGAGCATGGGATCATCGCTACGCCAGATATTTCGCATCACGCTCTCACATCCAGTGACCAATTTGTTGTGCTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACGGAGAAGTTTCCTCAATTGTGTGGAAGGCAGATACCGAAAAGGATGCAGCAAGGGCAGTAGTGGATGCAGCAACCGCAACATGGAAACGAAAGTATCCTTCGTCAAAGGCAGATGACTGCACCGTGATTTGCCTCTTCCTGAAAAAGAAACCACTGCATGTTGTTGGTTTGACTGGATGA 1011 0.455 MGICISAESSVIHGAPEEARDENVTVFKASNVLSGSEGLCSVYSKQGSKGLNQDAATLCQDYGTEDAAFCGVFDGHGRNGHMVSKIVNTRLSSLILNQKNPNVKVDTVEDDWGSNRNFKEWKEAITCAFGVMDKEVKLQENIDSSCSGTTAVVVIKQGEDLVIANLGDSRAVLGTVSDGEIIPIQLTTDMKPGLPREADRIRSCNGRVFALREEPHIQRVWLPNENSPGLAMSRAFGDFMLKEHGIIATPDISHHALTSSDQFVVLASDGVWDVLSNGEVSSIVWKADTEKDAARAVVDAATATWKRKYPSSKADDCTVICLFLKKKPLHVVGLTG* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1416 336 CDD PP2Cc 40 324 IPR001932 -
Apr5g1416 336 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 327 - -
Apr5g1416 336 SUPERFAMILY PP2C-like 38 325 IPR036457 -
Apr5g1416 336 SMART PP2C_4 29 322 IPR001932 -
Apr5g1416 336 Gene3D - 25 327 IPR036457 -
Apr5g1416 336 ProSiteProfiles PPM-type phosphatase domain profile. 39 324 IPR001932 -
Apr5g1416 336 Pfam Protein phosphatase 2C 56 303 IPR001932 -
Apr5g1416 336 PANTHER ALPHABET, ISOFORM E-RELATED 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1416 Apr-Chr5 18233863 18235498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1416 1 327 PP2C-type Phosphatase Gene Family AT5G26010 52.381 1.43e-103 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1416 - - gmx:100795893 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0318 9 4174098 4176357 Apr5g1416 5 18233863 18235498 PCT