Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1408 ATGGGAATAGCCAGGAAATGTTCATATTGTGGAAACTTTGGTCACAATGCAAGGACTTGTGACAAAAGTTTCAGTCACGGACAACTAAAGCTCTTTGGAGTGCAACTTGACGTTTATTCTTCTTCTTCTTCTTCATCAATCTCCTCTACTTCACCTTCATATTTTGCCATGAAAAGAAGTTTCAGCATGGACTACTCGTTATCTTCACGGACCTCTTCTTCTGTATCCTCCTCCTTTTCCTCGCCTTCCCTACTTGGTGCCAATGAAAATACAGATAGTTACTCCAGTGGCCTAATATCAACAATCCAAGACACCAAAAAAGGTGCACCGTGGACAGAGGAGGAACACCGGAAATTTCTTGAAGGGCTTGAGAAGCTGGGCAAGGGGAACTGGAGAGGCATATCTAAAAGTTTTGTGACAACAAGAACACCTACCCAAGTGGCCAGTCATGCACAAAAATATTTTCTTCGCAAGTCTCAGAGAAGTTTCAATAAAAGAAAACACCATGCCAACCTGTTCGATGTGGGAAATGGAAGTAAAATCACATTTACACCATTTAATTCTTGCTTTTCTAAATCAAGAGCAGCTTTTGGTACATTTAAATTCCATTCTAATGATCTCAGCAGCTTCAGCCAATTAAGTAGCAATCGAACTTTTATTCCTCAGTGGCTTGCGCATCCTCATTCAACAAATTGCATTTTTCAGAGCAAAGCCCCAGATTTAGAACTCAAACTTGCAACTCCTACGCCATTGGAGCTCACAGAGGCATGCTCTACAAGCCTTTTAAGTTGA 792 0.4116 MGIARKCSYCGNFGHNARTCDKSFSHGQLKLFGVQLDVYSSSSSSSISSTSPSYFAMKRSFSMDYSLSSRTSSSVSSSFSSPSLLGANENTDSYSSGLISTIQDTKKGAPWTEEEHRKFLEGLEKLGKGNWRGISKSFVTTRTPTQVASHAQKYFLRKSQRSFNKRKHHANLFDVGNGSKITFTPFNSCFSKSRAAFGTFKFHSNDLSSFSQLSSNRTFIPQWLAHPHSTNCIFQSKAPDLELKLATPTPLELTEACSTSLLS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1408 263 PANTHER TRANSCRIPTION FACTOR KUA1 4 195 - -
Apr5g1408 263 CDD SANT 110 155 IPR001005 -
Apr5g1408 263 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 195 - -
Apr5g1408 263 ProSiteProfiles SANT domain profile. 111 159 IPR017884 -
Apr5g1408 263 ProSiteProfiles Myb-like domain profile. 103 155 IPR001005 -
Apr5g1408 263 Pfam Myb-like DNA-binding domain 110 155 IPR001005 -
Apr5g1408 263 Gene3D - 111 160 - -
Apr5g1408 263 SMART sant 107 157 IPR001005 -
Apr5g1408 263 SUPERFAMILY Homeodomain-like 105 159 IPR009057 -
Apr5g1408 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 159 IPR017930 -
Apr5g1408 263 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 106 158 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1408 Apr-Chr5 18186860 18188294 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr5g1408 Myb_DNA-binding 8.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1408 - - aprc:113866246 482.256