Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1406 ATGTTTTTTATTGAGGTTTCCTCTGTTCTTTTTCTCGCTTTATTCCCAACCGCTTTCGATGTAATCGATAATGATCGTTCTTTTTCCTTTTTCTTCTCAGGATCTGTGGCCACTGCTCCAGCGACTCGTTGGAAAAACTCCTCGCTTCTCAGGTCAATCAATTATTTTAAAGGGAATCTAAACTCTTTAGACGGTGCTTTTTCCCAAATAGAAAATTCGTCGCTTTTCCAGCACCTTCCACAATCAATGACAAACTCGAGTTGTGGAGGCACAGAGTTAGAGCTCTGCAGAGATGAGTCAGCCGCATTCGTTCTCAAGTTTGTTGCCATCGCTTCCATTCTATTATCCGGCATGGCCGGAATCGCGATCCCACTCATCGGCAAACACCGTCGCTTCCTCCGCACCGACGGCAATCTCTTCGTGGCCGCGAAGGCCTTCGCGGCGGGGGTGATTCTGGCCACCGGGTTCGTCCACATGCTTTCGGACGCGTCGGAAGCGCTCCACCATCCATGCTTGCCTTCGTTTCCATGGTCCAAGTTTCCCTTCACGGGGTTCTTCGCCATGATGGCTGCGCTCTTCACTCTCCTCCTTGATTTCGTGGGGACTCAGTATTACGAGCGAAAGCAGGGGCTGAATCGGGCATCGGAGGAGCAATCTCGGGTCGGTTCATCGGAACCCGGTGTTGTGGAGTGGAATGGAGGGAAAGTGTTTGGGGAAGAGGAAAGCGGTGGAATGCACATAGTGGGGATGCATGCACACGCCGCTCACCATAGACATAACCACCCTCATGGCCATGAAGCATGTCATGGCATTGGGGGCGTGAAGGAACAAGGCCACGCGCATGGGCACGGGCACGGGCACGGGCACGGGCATGGTCACTCCCACATCGAAGACGAGGAAGAAACTGACGTCAGACACGTCGTCGTTTCGCAGGTGTTGGAACTTGGGATAGTGTCACATTCGGTGATAATTGGGTTGTCTCTGGGAGTTTCGCAAAGTCCGTGTGCAATAAGGCCTTTGATTGCGGCATTATCGTTTCATCAGTTTTTTGAAGGGTTCGCGCTTGGAGGGTGCATCTCACAGGCGCAGTTCAAGGCATCATCTGCTACAATAATGGCTTGTTTTTTTGCTCTAACGACGCCGTTGGGTGTTGGGATTGGAACGGGTATTGCTTCGGTGTATAACCCTTACAGCACAGGTGCACTTGTCACCGAAGGTATATTGGATTCCTTGTCAGCAGGGATTTTAGTGTATATGGCTTTGGTAGATTTGATAGCTGCAGATTTTCTTAGCAAGAGAATGAGTTGTAACTTTAGGCTCCAGATTTTGTCTTATTGTATGCTTTTCCTTGGGGCTGGATTGATGTCTTCGCTCGCAATTTGGGCATGA 1389 0.5032 MFFIEVSSVLFLALFPTAFDVIDNDRSFSFFFSGSVATAPATRWKNSSLLRSINYFKGNLNSLDGAFSQIENSSLFQHLPQSMTNSSCGGTELELCRDESAAFVLKFVAIASILLSGMAGIAIPLIGKHRRFLRTDGNLFVAAKAFAAGVILATGFVHMLSDASEALHHPCLPSFPWSKFPFTGFFAMMAALFTLLLDFVGTQYYERKQGLNRASEEQSRVGSSEPGVVEWNGGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGHEACHGIGGVKEQGHAHGHGHGHGHGHGHSHIEDEEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCAIRPLIAALSFHQFFEGFALGGCISQAQFKASSATIMACFFALTTPLGVGIGTGIASVYNPYSTGALVTEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQILSYCMLFLGAGLMSSLAIWA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1406 462 MobiDBLite consensus disorder prediction 265 283 - -
Apr5g1406 462 Pfam ZIP Zinc transporter 104 459 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Apr5g1406 462 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 83 462 - -
Apr5g1406 462 MobiDBLite consensus disorder prediction 258 301 - -
Apr5g1406 462 PANTHER ZINC/IRON TRANSPORTER 83 462 - -
Apr5g1406 462 TIGRFAM zip: ZIP zinc/iron transport family 91 462 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1406 Apr-Chr5 18167948 18169789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1406 60 462 Inorganic Solute Cotransporters AT1G60960 70.673 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1406 K14709 - gmx:100812212 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0301 9 3928494 3932218 Apr5g1406 5 18167948 18169789 PCT