Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1398 ATGGGAAGACAGCCACTGATAATTATAGCAGATGCAGAACTTTGTAAAGAGGCCGGAATTAAAAAATTTAAAGATATTCCAAACAGAAGTATTCCCTCACCTATTTCTGCTTCCCCTCTTCATCAAAAAGGTCTCTTCTTCACCCGGGATTCACAATGGTCTACCATGCGAAACACTATATTGTCGGTTTACCAGCCATCACACTTATCCAGATTAGTGCCAACAATGCAATCATTCGTAGAATCTGCCACCCAAAACCTTGACTCTCAAAAAGAAGACATTATTTTTTCCAATCTGTCCCTCAGACTGGCAACTGATGTCATTGGACAGGCAGCATTTGGTGTCAACTTTGGCCTCTCAAAGCCTCATTCTATTTGTGACACTATCAAGTGTGTTAACAATACCAATGAAAGTGGCAGTAATGAAGTATCAGATTTCATAAACCAACACATTTACTCCACAACCCAACTTAAAATGGACATGTCTGGTTCATTTTCCATCATATTAGGTCTTCTTATCCCAATACTCCAAGAGCCATTTAGACAAATTCTGAAGAGAATACCAGGCACTATGGATTGGAAGATTGAACGTACCAACAAGAAACTAAGTGGCCGTCTTGATGAGATTGTGGAAAAGAGAATGAAAGATAAGACAAGAACCTCAAAGGATTTCTTGTCACTTATATTAAATGCCAGGGAATCAAGAGCTGTGTCAGAGAATGTGTTCACACATGAATACATCAGTGCTGTTACTTACGAGCATCTACTTGCTGGGTCAGCAACCACGTCCTTTACTTTGTCTTCTGTTGTCTATTTGGTTGCTGGACATCCTGAAGTTGAGAAAAAGCTGCTTCAAGAGATTGATGGGTTTGGTCCAGTGGATCAGACACCCACTTCCCAAGAACTTCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTAGTTGCAAGGGAAACATCAAATCCGGTAGAGATTGGAGGCTATCTTCTCCCAAAGGGGACTTGGGTCTGGTTAGCTCTTGGAGTTCTAGCAAAAGATCCCACTAACTTTCCAGAGCCAGAAAAGTTCGAACCAGAGAGGTTTGACCCCAATTGTGAAGAAATGAAACGAAGGCATCCCTATGCTTTTGTACCATTTGGAATTGGTCCTCGGGCTTGCATTGGTCAAAAATTTTCCCTGCAAGAGATCAAGCTTTCTCTTATTCATTTATATCGGAAATACTTGTTTCGGCATTCACCTAACATGGAAAACCCTTTAGAACTCGAGTATGGTATAGTCCTCAATTTCAAGCATGGGGTCAAGCTCAGAGCCATAAAAAGAACCTAG 1359 0.4121 MGRQPLIIIADAELCKEAGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLSRLVPTMQSFVESATQNLDSQKEDIIFSNLSLRLATDVIGQAAFGVNFGLSKPHSICDTIKCVNNTNESGSNEVSDFINQHIYSTTQLKMDMSGSFSIILGLLIPILQEPFRQILKRIPGTMDWKIERTNKKLSGRLDEIVEKRMKDKTRTSKDFLSLILNARESRAVSENVFTHEYISAVTYEHLLAGSATTSFTLSSVVYLVAGHPEVEKKLLQEIDGFGPVDQTPTSQELHDKFPYLDQVIKEAMRFYTVSPLVARETSNPVEIGGYLLPKGTWVWLALGVLAKDPTNFPEPEKFEPERFDPNCEEMKRRHPYAFVPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKHGVKLRAIKRT* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1398 452 Pfam Cytochrome P450 1 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS P450 superfamily signature 257 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS P450 superfamily signature 311 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS P450 superfamily signature 388 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 452 - -
Apr5g1398 452 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 390 399 IPR017972 GO:0005506|GO:0016705
Apr5g1398 452 PANTHER THROMBOXANE-A SYNTHASE 1 452 - -
Apr5g1398 452 Gene3D Cytochrome P450 1 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS E-class P450 group I signature 103 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS E-class P450 group I signature 246 263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS E-class P450 group I signature 266 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS E-class P450 group I signature 310 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS E-class P450 group I signature 350 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS E-class P450 group I signature 387 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 PRINTS E-class P450 group I signature 397 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g1398 452 SUPERFAMILY Cytochrome P450 1 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1398 Apr-Chr5 18101210 18104501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1398 1 451 Cytochrome P450 AT2G26170 74.945 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1398 K20771 - gmx:100797803 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0289 9 3784303 3790573 Apr5g1398 5 18101210 18104501 PCT