Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1397 ATGGGTGCCTCAGGAAAGTGGGTAAAAGCGCTAATCGGACTCAAGAAACCAGACAAAGACGAGCATGTGAAGGAGGGTGGTAAGAGCAAGAAGTGGAAGTTATGGAGGAGCTCTTCTGGGGACATGGGTTCGTGGAAGGGTTTCAAAGGGAACCACAAAGCAGCTTCTGAAGGGTCTGATTCTCCCCCTGTTGCAGTAAATGCTTTTACAGCTGCAGTGGCCACTGTGGTTCGAGCTCTTCCTAAGGATTTTAGATTAGTTAGGCAAGAATGGGCTGCTATAAGAATCCAAACTTCCTTCCGCGCTTTCTTGGCAAGAAGGGCTTTGAGGGCTTTGAAGGGAGTGGTGAGGATTCAAGCTCTTGTTCGGGGGAGACAGGTGAGGAAGCAAGCTGCAGTGACATTGAGGTGCATGCAGGCACTGGTTCGTGTTCAAGCGCGAGTCAGAGCTCGGCGTGTGAGGATGTCCATAGAGGGGCAAGCTGTCCAGAACATGCTCAACGAGAGACGCAGCAAGCTTGATATTTTGAAGCAAGCAGAGGAGGGGTGGTGTGACAGTAGAGGAACATTGGAAGATGTCAAAGCAAAAATACAAATGAGGCAAGAGGGAGCTTTCAAAAGAGAAAGAGTAATAGCATACTCTCTTGCTCAGAAGCAATGCAGATCAACCCCAAGTTCTAATTCACGAACAAATACCACCTTTTCCTCTCTCAAGAATCATGAGGTTAACAAAGCTAATTGGGGGTGGAGTTGGTTGGAACGTTGGATGGCAGCCAAGCCTTGGGAGTGTAGATTGATGGAACAATCACATGCTGAAGGCCTGGAGAAAACCCCACCTCCAAAGAAGTTTGTTGAATCCTTTGAAATCACTAATTCCAAACCAAGTTTGGTAAAAGTCAAGAAGAACAATGTCACAACAAGGATTTTAGCTAGGCCTCCTCATATTGGGCAAGCTACTCGTTCATCCTCTAGTCCAAGTTCTGAGTTTCGGTATGATGAGAGTTCTGCATCATCTTCCATTTGTACATCTACAACACCAATGTCTGGGAACACTTGTGACAGGACTGAGGATAGCGGTAACACTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGATAAAAACAGGAAGTCAAATGTATAATAGAGCTCAAAGACAGCAGTCCATGGATGAGTTTCAGTTTCTCAAGAGGGCAGCGGTTTTCTCAAATGGAGATTCCAAAAGCAATTTTGGTTCTGACCCTTCAATCAACTTTTCTAGGCCACTTCACTTGGACAAGAGCTCAGTGAGGCCAAGGTGA 1308 0.4618 MGASGKWVKALIGLKKPDKDEHVKEGGKSKKWKLWRSSSGDMGSWKGFKGNHKAASEGSDSPPVAVNAFTAAVATVVRALPKDFRLVRQEWAAIRIQTSFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRSKLDILKQAEEGWCDSRGTLEDVKAKIQMRQEGAFKRERVIAYSLAQKQCRSTPSSNSRTNTTFSSLKNHEVNKANWGWSWLERWMAAKPWECRLMEQSHAEGLEKTPPPKKFVESFEITNSKPSLVKVKKNNVTTRILARPPHIGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTEDSGNTRPNYMNLTQSTKAKIKTGSQMYNRAQRQQSMDEFQFLKRAAVFSNGDSKSNFGSDPSINFSRPLHLDKSSVRPR* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1397 435 Pfam Protein of unknown function (DUF4005) 333 406 IPR025064 -
Apr5g1397 435 MobiDBLite consensus disorder prediction 19 38 - -
Apr5g1397 435 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Apr5g1397 435 MobiDBLite consensus disorder prediction 310 365 - -
Apr5g1397 435 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Apr5g1397 435 MobiDBLite consensus disorder prediction 19 35 - -
Apr5g1397 435 MobiDBLite consensus disorder prediction 316 365 - -
Apr5g1397 435 MobiDBLite consensus disorder prediction 406 435 - -
Apr5g1397 435 PANTHER IQ-DOMAIN 5-RELATED 1 434 - -
Apr5g1397 435 Gene3D - 87 140 - -
Apr5g1397 435 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1397 Apr-Chr5 18098841 18100657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1397 1 435 IQD Protein Family AT2G26180 60.407 2.19e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1397 - - gmx:100799714 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0288 9 3782840 3785437 Apr5g1397 5 18098841 18100657 PCT