Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1378 ATGAGTTTGAGTGCAGCCGAGGATGATTCGGCTTCAGAAATTCACCTACCAGCAGAGATTGATTGGCACATGCTCGATAAGTCCAAGTTTTTCTTCCTAGGCGCCGCCTTATTTTCCGGTGTTTCAGCTGCTCTTTATCCTATGGTCGTGTTGAAAACCCGACAACAAGTTTCTTCGGCACAATTCTCCTGCCTCAACATGTCTAGTGCCATTTTGCGCTACGAAGGCTTCAGAGGCTTCTATAAAGGTTTTGGTACTTCTTTGATGGGAACCATCCCTGCTCGTGCACTTTACATGGCTTCCCTTGAAGTCACAAAAAGCAACGTTGGCACTGCTTTTCTTGGACTAGGGTTTTCAGATACCTCGGCTATTGCAGTGGCTAATGCTGCTGCTGGTGTTACTTCTGCTATGGCTGCACAGTTAGTTTGGACCCCAATTGATGTTGTAAGTCAGAGACTTATGGTTCAAGGTAGTGGTGGAAGCAAAAGTATTCTTGCTAATCTTAATTCTGAGAATTACAGAAATGGCCTCGATGCGTTTAGGAAGATTCTGTGTGCTGATGGACCAAGAGGGTTTTATAGGGGATTTGGGATTTCTATATTGACTTATGCACCATCCAATGCGGTATGGTGGACTTCATACTCTATGGTCCATAGGCTCATATGGGGTGCTTTTGGTTGCTATATGGGTAAGAGGGATGAGAATAATAGTAGTAGTTTGGGTAATGGGTGTGGTGTTTTTAGGCCTGATTCCAAGGCGATGGTGGCAGTGCAAGGTTTGAGTGCGGTTATGGCAAGTGGGGTCTCAGCAATTGTGACAATGCCTCTTGACACGATCAAGACAAGGTTGCAGGTGTTGGATACAGAAGAGAATGGGCGAAGGAGGCCTTTAACTTTTGTGCAAACTGTTAGGAATTTGGTAAAGGAAGGTGGCTTGCTTGCTTGTTACAGAGGATTGGGTCCAAGATGGGCTTCAATGTCAATGTCTGCAACAACTATGATTACTACTTATGAGTTTTTGAAACGTTTGTCTACCAAGAGTCAAGACAAGTTGACCACATGA 1062 0.4463 MSLSAAEDDSASEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSAQFSCLNMSSAILRYEGFRGFYKGFGTSLMGTIPARALYMASLEVTKSNVGTAFLGLGFSDTSAIAVANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGSGGSKSILANLNSENYRNGLDAFRKILCADGPRGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGCYMGKRDENNSSSLGNGCGVFRPDSKAMVAVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDTEENGRRRPLTFVQTVRNLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRLSTKSQDKLTT* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1378 353 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 350 - -
Apr5g1378 353 Pfam Mitochondrial carrier protein 256 347 IPR018108 -
Apr5g1378 353 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Apr5g1378 353 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Apr5g1378 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 343 IPR018108 -
Apr5g1378 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Apr5g1378 353 Gene3D Mitochondrial carrier domain 29 352 IPR023395 -
Apr5g1378 353 SUPERFAMILY Mitochondrial carrier 23 340 IPR023395 -
Apr5g1378 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Apr5g1378 353 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1378 Apr-Chr5 17962434 17964859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1378 1 349 Chloroplast and Mitochondria Gene Families AT1G72820 67.614 1.72e-169 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1378 K15121 - gmx:100784202 576.63