Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1372 ATGAACATGAGTAACAGTCCTCGCTCTGAGCGTAACCTGTCTCGCCAATCTTCCAAATCTAATTTGGGAGTGAAGCAAGAGACAGCTACTTCTCTCCCTTCTGGATGCTGTCGAGGCTTCAACAGCGTTAGGACTGTGTCTTCCACCGCCCTAACATCGCAACACCATCAGCTTCAACAGCGTTATGAAAGATTCCAAGCAAAGGTGGCTGGTTTGGAAAAGGAGGTGCAAAGGCAGAAAGAACTTAGAGTGATGTATAAGAAAAGAATGGAAAGGACACAAGATTACTTAAGGTACTGTCTCCAAATCGCACAAGATAATGGAATCTTGGACCTCATTCTCCACTCCAAAGGTGAACTTCAGCTGCCACAATCTCCCCCCCCTCTCTACACTCCTCAGATTCCCACTCCTTCGCATCACCACCCCAATCTAACGCCCATCATCCATCAAGCCAAAATCAACGGATGGTATATTAATCCAAGTGAGATTGAGTTGGAAGAGAAAATAGGGCAGGGAACCACAGCGGACATTCATAAGGGAACATGGCGCGGATTTGATGTGGCGGTGAAGTGCATGGCACCTGAATTCTTCCGCACAAACACAAACGGTGTCGTATTCTTCGCTCAGGAGCTTGAAACTCTCGCCAAACAGCGCCACCGTTTCGTGCTTCACCTTATGGGTGCGTGCCTTGAGCCTCCTCATCATGCATGGGTCGTTACGGAGTATCTCAACACCACGCTAAAGGAGTGGCTCCATGGCCCAGGAAAAAGGCCCAAAACCCGAATTGTGCCACTCCCTCCTTTAAAAGATAGAGTAATGAGCGCCTTAGAGATAGCCCAAGCCATGCAGTATCTCCACGAACAAAAGCCCAAAGTCATTCACCGTGACTTGAAGCCCAGCAACATTTTCCTAGACGATGCCATGCATGTTAGAGTTGCGGATTTTGGACACGCTCGCTTCTTGGGTGACGATGAAATGGCTCTCACCGGAGAAACTGGAACATACGTATACATGGCACCCGAGGTGATTCGGTGTGAGCCCTATAATGAAAAATGTGATGTATACAGTTTTGGAGTCATACTGAACGAGCTTCTGACTGGAAAATACCCCTACATTGAGACAGAATTTGGTCCTGCCAAGATTGCTATGGAAGTTGTGGAGGGGAAGCTAAGGCCTATGCTTCCATCAAGGGACGATGGTGACCAACTGGGAGAGTTGGTTGACCTAGTGTGCCTTTGCTGGGACGGAACTCCATCTACTCGACCATCCTTTGCAACCATTAGCCTCAGCCTTAAAGGCTATGCCAATAGGGTCCTTCAAAATTCACACTAG 1332 0.482 MNMSNSPRSERNLSRQSSKSNLGVKQETATSLPSGCCRGFNSVRTVSSTALTSQHHQLQQRYERFQAKVAGLEKEVQRQKELRVMYKKRMERTQDYLRYCLQIAQDNGILDLILHSKGELQLPQSPPPLYTPQIPTPSHHHPNLTPIIHQAKINGWYINPSEIELEEKIGQGTTADIHKGTWRGFDVAVKCMAPEFFRTNTNGVVFFAQELETLAKQRHRFVLHLMGACLEPPHHAWVVTEYLNTTLKEWLHGPGKRPKTRIVPLPPLKDRVMSALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAMHVRVADFGHARFLGDDEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGVILNELLTGKYPYIETEFGPAKIAMEVVEGKLRPMLPSRDDGDQLGELVDLVCLCWDGTPSTRPSFATISLSLKGYANRVLQNSH* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1372 443 Gene3D Phosphorylase Kinase; domain 1 146 244 - -
Apr5g1372 443 SMART serkin_6 163 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1372 443 PANTHER OS09G0443600 PROTEIN 25 438 - -
Apr5g1372 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Apr5g1372 443 MobiDBLite consensus disorder prediction 1 31 - -
Apr5g1372 443 SUPERFAMILY Protein kinase-like (PK-like) 131 427 IPR011009 -
Apr5g1372 443 Coils Coil 55 89 - -
Apr5g1372 443 ProSiteProfiles Protein kinase domain profile. 163 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1372 443 Pfam Protein kinase domain 164 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1372 443 CDD STKc_MAP3K-like 169 427 - -
Apr5g1372 443 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 438 - -
Apr5g1372 443 Gene3D Transferase(Phosphotransferase) domain 1 265 443 - -
Apr5g1372 443 ProSitePatterns Protein kinases ATP-binding region signature. 169 190 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1372 Apr-Chr5 17923507 17926747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1372 154 427 MAP Kinase Kinase Kinase AT2G17700 36.364 2.93e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Apr5g1372 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1372 - - gmx:100810435 758.444