Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1358 ATGCCCGAACTCACCATGAATCTGCGCAAGGGCTCTAAGGTTTGGGTCCGTGACAGAGACTTGGCCTGGCTCCCTGCTGAAGTTCTCGAATCTTCCGGAAAACAGGTTCGCGTTGTCATCGCTTCTGGCAAGAAGGTTCTTGTTCCTCCGGAGAATCTGTTTCCCAGGGATGCGGATGAAGATGAGCATGGAGGAGTCGAAGATATGACGAAGTTGGCTTACTTGAACGAGCCTGGGGTGTTGTACAATCTCCACAGAAGATATGCGCTGAATGATATTTATACATATACAGGGACCATTTTAATAGCTGTTAATCCTTTCACAAAACTTCCTCATTTGTATGATATCCACATGATGGAGCAGTACAAGGGAGCTCCATTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTCAAAGCCAGTCTATCTTGGTCAGTGGGGAAAGTGGTGCTGGGAAAACTGAGACAACAAAATTGATTATGCAATATCTTACCTTTGTTGGTGGGCGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGTAATGCAAGGACTGTCAGAAATGACAATTCAAGCCGTTTTGGAAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCTATTAGAACTTACTTACTGGAAAGATCACGAGTTGTACAGATAACGGATCCAGAAAGAAATTATCATTGCTTTTATCAATTGTGTGCATCTGAAAGGGATGTAGAGAAGTATAAGTTAGGACATGCAAGCCACTTCCACTATTTGAATCAAAGTAAAGTTTATGAATTAGATGGGGTAAGCAGTGCTGAAGAATACATGAAGACGAGGAGAGCGATGGATATTGTTGGCATAAGTCATGATGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTGCATTTGGGGAATATTGAATTTTCTCCTGGAAAAGAGCATGACTCATCAGTAATAAAAGATGAAAAATCAAGATTTCATTTGCAGATGGCTGCTAATCTTTTCAAGTGTGATTTAAACTTGCTGCTGGCAACTTTGTGTTCCCGTTCAATACAAACCAGAGAAGGAAATATTGTCAAAGCTCTTGACTGTAATGCTGCTGTTGCTGGCCGGGATGCTTTGGCAAAAACTGTTTATGCTCGATTATTTGATTGGCTTGTTGATAAGATCAATAGTTCTGTTGGGCAAGATATCAATTCCCAGATGCAAATTGGAGTTTTGGATATCTATGGTTTTGAGTGCTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCTAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAATATAGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATAATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCGACCCATGAAACACTCTCAACAAAGTTGTTTAAGCATTTCCTCTCCCACCCTAGATTAGAAAAGGAGAAGTTTTCAGAAACTGATTTTACCATTTCTCATTATGCTGGAAAGGTCACTTACCATACAGATACCTTCTTAGACAAAAATCGTGATTATGTAGTCGTAGAACATTGTAATTTATTATCTTCTTCAAAATGCCCATTTGTGTCGGCTCTTTTTCCTTTGCTACCGGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTCATGGAAACACTTAACACAACAGAGCCCCATTACATTCGATGTGTTAAGCCAAATTCATTGAATCGACCACAGAAGTTTGAGAGCACAAGTGTTTTACACCAGTTACGTTGTGGGGGGGTCCTTGAGGCTGTCCGGATAAGTTTGGCAGGTTACCCTACTCGAAGGATTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGTAACTCAGAAAATATTGCAAAAGCTACAGCTTGAGAGTTTTCAGTTAGGTAGGACCAAAGTGTTTCTCAGGGCTGGTCAAATTGGCATTTTAGACACTAGACGTGCAGAGGTTTTGGACAATGCTGCAAAGTGTATTCAGCGTCGACTGCGAACATTTATTGCACACAGGGATTTCATCTCTGTCCGTGCTACTGCACTTTCTCTTCAAGCATGCTGCAGGGGATGTTTTGCCCGAAAGATATATGCTTTTAAACGGGAGACAGCAGCAGCTGTCTCCATTCAGAAATATATTCGTATGTGTCTGATGAGGCATGCTTATGTGCAAATACATTCTTCTGCTATTATCGTACAATCCATTGTTCGTGGTTTTACAACTCGTCGGAGATTCTTGCATAGAAAAGAACACACAGCTGCCACTTTTATTCAGGCCTATTGGAGGATGTGCAAGGTTCGCTCTGCTTTTCAACAACATCAACGATCAATTGTAGCAATACAATGCCTTTGGCGGTGTAGACAAGCAAAAAGAGAGCTTCGGAGGCTTAAACAAGAGGCTAATGAAGCTGGGGCCCTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAAGAACTTACATGGCGTTTGCATCTTGAGAAAAAAATAAAGGCGTCTAATGATGAAGCTAAGCAAGTTGAGATTTCAAAACTTCATAAAATATTAGATGCTCTGAATCTTGAATTGGATGCAGCTAAATTGGCAACAAATAATGAGAGCAACAAGAATGCATTTCTGCAAAATCAGTTGCAATTGTCTCTAAAGGAAAAGTCTGCTTTAGAAAGAGAGCTAGCTGCAATGGATGAAATGCGAAAGGAAAATGCTCTGTTAAAGGGTTCTTTGGATGCCTTTGAAAAAAAGAGTAGTGCTTTGGAGCTTGAGCTTGTTAATGCTCGTAAAGACCATGATGAAACCATTCAGAAAATGAGGGAGTTTGAACATAAGTGTTCTCAACTTGGGCAAAATGTGAAAAGTCTTGAGGAAAAGCTATTGAGTGTAGAGGATGAAAATCACGTGCTTCGTCAAAAAGCCTTAAATGTATCTCCCAAGAATAACCAACCAGTTTTTACAAAGTCATTTTCAGAAAAATACTTGAGTGCAATAGCCCCCCGCACTGAGCGAAAGCCCACATTTGAATCCCCCACACCCACAAAACTTATTGTCCCTTTTAGTCTTGGCTTGTCAGACTCTCGTCGATCTAAATTAACAGCAGAGAGGCATCAGGATAACTATGAATTTCTCTCTAGGTGTATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTTTAGCAGCTAGTATCATATACAAATGTCTTCATCATTGGCATGCCTTTGAATCTGAGCGCACTGGTATATTTGATTACATAATTGATGGAATTAATGAAGTCCTTAAGGTTAAGGATGATGACATTGTCTTGCCATACTGGTTGTCCAATACCTCTGCACTTCTATGCCTCTTACAAAGGAACTTGCGCTCAAATGGCTTTTTGACTGCCACTTCTCAACGTTATGCTGGATCATCTAGCTTGACCAGTCGGATAGGGCATGGACTGAAGTCTCCATTGAAGTTTATTGGATATGATGATGGTATGTCACATGTGGAGGCAAGATATCCAGCTATACTTTTTAAACAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGTCTTATACGTGATAATTTGAAAAAAGAACTTTCTCCACTTCTGGGATCATGTATTCAGGCACCCAAAACAGGAAGAATGCAAGGTGGAAAATCATCTAGATCTCCTGGTGGGCTCCCTCAACAATCATCCGTTGGTCAATGGGACCACATTATCAAATTTTTGGATTCCCTCATGAGCTGCTTATGTGCAAATCATGTACCATCCTTCTTCATCCGCAAGCTTGTTACTCAGGTTTTTTCCTTCATCAACATTACACTCTTTAACAGCCTTCTGTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTGAAGTCTGGTCTCGCAGAACTGGAGAAATGGATAGTTAATGCAAAGGAGGAGTATGCAGGAACATCTTGGCATGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAAAAGAGGAAGAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTAACTGTAAGGCAAATTTATCGCATCAGTACTATGTACTGGGATGACAAGTACGGAACCCAGAGCGTGTCCAATGAGGTAGTTGGTGAAATGAGGGAAATTGTGAGCAAGGATAATCAGAATTTGACCTCTAATTCGTTCTTGTTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATAAGGCAATCCCCGCTATAAATACTGATGATATTGACCTACCAGCATTTTTGTGTGAATATCCTTGTGCCCAGTTTCTTACTGTGCATGATTAG 4563 0.3991 MPELTMNLRKGSKVWVRDRDLAWLPAEVLESSGKQVRVVIASGKKVLVPPENLFPRDADEDEHGGVEDMTKLAYLNEPGVLYNLHRRYALNDIYTYTGTILIAVNPFTKLPHLYDIHMMEQYKGAPFGELSPHVFAVADASYRAMMNEGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGHASHFHYLNQSKVYELDGVSSAEEYMKTRRAMDIVGISHDDQEAIFCTLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHLQMAANLFKCDLNLLLATLCSRSIQTREGNIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINSSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETLSTKLFKHFLSHPRLEKEKFSETDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSALFPLLPEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNRPQKFESTSVLHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYDDKAVTQKILQKLQLESFQLGRTKVFLRAGQIGILDTRRAEVLDNAAKCIQRRLRTFIAHRDFISVRATALSLQACCRGCFARKIYAFKRETAAAVSIQKYIRMCLMRHAYVQIHSSAIIVQSIVRGFTTRRRFLHRKEHTAATFIQAYWRMCKVRSAFQQHQRSIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIKASNDEAKQVEISKLHKILDALNLELDAAKLATNNESNKNAFLQNQLQLSLKEKSALERELAAMDEMRKENALLKGSLDAFEKKSSALELELVNARKDHDETIQKMREFEHKCSQLGQNVKSLEEKLLSVEDENHVLRQKALNVSPKNNQPVFTKSFSEKYLSAIAPRTERKPTFESPTPTKLIVPFSLGLSDSRRSKLTAERHQDNYEFLSRCIKEDLGFKNGKPLAASIIYKCLHHWHAFESERTGIFDYIIDGINEVLKVKDDDIVLPYWLSNTSALLCLLQRNLRSNGFLTATSQRYAGSSSLTSRIGHGLKSPLKFIGYDDGMSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGSCIQAPKTGRMQGGKSSRSPGGLPQQSSVGQWDHIIKFLDSLMSCLCANHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVGEMREIVSKDNQNLTSNSFLLDDDMSIPFSAEDIDKAIPAINTDDIDLPAFLCEYPCAQFLTVHD* 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1358 1520 Pfam Myosin head (motor domain) 66 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g1358 1520 SMART MYSc_2a 58 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g1358 1520 Gene3D - 669 735 - -
Apr5g1358 1520 Gene3D Myosin VI head, motor domain, U50 subdomain 313 603 - -
Apr5g1358 1520 SMART DIL_2 1339 1446 IPR002710 -
Apr5g1358 1520 MobiDBLite consensus disorder prediction 1287 1307 - -
Apr5g1358 1520 Pfam DIL domain 1340 1443 IPR002710 -
Apr5g1358 1520 Gene3D - 736 786 - -
Apr5g1358 1520 Gene3D - 787 833 - -
Apr5g1358 1520 Gene3D - 834 884 - -
Apr5g1358 1520 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Apr5g1358 1520 Gene3D Kinesin motor domain 67 664 IPR036961 -
Apr5g1358 1520 ProSiteProfiles Dilute domain profile. 1164 1464 IPR002710 -
Apr5g1358 1520 CDD MYSc_Myo11 78 722 IPR036018 -
Apr5g1358 1520 SMART iq_5 759 781 IPR000048 GO:0005515
Apr5g1358 1520 SMART iq_5 784 806 IPR000048 GO:0005515
Apr5g1358 1520 SMART iq_5 807 829 IPR000048 GO:0005515
Apr5g1358 1520 SMART iq_5 832 854 IPR000048 GO:0005515
Apr5g1358 1520 SMART iq_5 736 758 IPR000048 GO:0005515
Apr5g1358 1520 SMART iq_5 855 877 IPR000048 GO:0005515
Apr5g1358 1520 ProSiteProfiles IQ motif profile. 833 862 IPR000048 GO:0005515
Apr5g1358 1520 CDD MyosinXI_CBD 1115 1487 IPR037975 GO:0007015
Apr5g1358 1520 ProSiteProfiles IQ motif profile. 808 837 IPR000048 GO:0005515
Apr5g1358 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 784 IPR027417 -
Apr5g1358 1520 MobiDBLite consensus disorder prediction 1291 1307 - -
Apr5g1358 1520 Coils Coil 869 913 - -
Apr5g1358 1520 Gene3D - 440 625 - -
Apr5g1358 1520 ProSiteProfiles IQ motif profile. 761 789 IPR000048 GO:0005515
Apr5g1358 1520 Coils Coil 953 1053 - -
Apr5g1358 1520 PANTHER MYOSIN 7 1517 - -
Apr5g1358 1520 PANTHER PROTEIN OPAQUE1-LIKE 7 1517 - -
Apr5g1358 1520 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr5g1358 1520 Pfam IQ calmodulin-binding motif 786 805 IPR000048 GO:0005515
Apr5g1358 1520 Pfam IQ calmodulin-binding motif 835 854 IPR000048 GO:0005515
Apr5g1358 1520 Pfam IQ calmodulin-binding motif 809 828 IPR000048 GO:0005515
Apr5g1358 1520 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g1358 1520 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g1358 1520 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g1358 1520 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g1358 1520 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g1358 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 883 IPR027417 -
Apr5g1358 1520 Gene3D - 254 311 - -
Apr5g1358 1520 ProSiteProfiles Myosin motor domain profile. 64 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1358 Apr-Chr5 17792697 17818613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1358 4 1517 Myosins gene family AT4G33200 73.531 0.0 2283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1358 K10357 - gmx:100796413 2744.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0280 9 3685565 3711507 Apr5g1358 5 17792697 17818613 PCT