Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1354 ATGACTTCTAAAAGGATTACATGGAAGTCCATTGTCTTTATCTTAAGTTGTTACAAGACTAGATGTCCCTTGCAGGAATCAGAAAAACAGGTTTTGAAACAAGGTTCTTTCCAAAGGGTGTGCCTCTCGGATGTAAGCATTTCGAGCTCCACTCGGGTCATTGAAGATCTTTCCATTTCCCTTGTTGGTCCAAAGCTTTATACATTCACACTTGAGGAGCTAAGAGAAGCAACACATAATTTCTCATGGAGTAATCTGCTTGGTGAAGGTGGGTTTGGACCCGTGTACAAGGGCTTTGTTGATGACAAGCTTAAACCGGGCTTGAAGGCTCAGCCTGTTGCTGTGAAACGATTGGACTTGGATGGCTTGCAAGGTCATAGGGAGTGGCTGGCGGAGATTATATTTCTCGGACAATTAAGGCATCCACATCTTGTTAAGTTAATCGGGTACTGTTGTGAGGAGGAGCACAGGCTTTTGGTGTATGAACATATGGCAAGAGGCAGCTTGGAGAATCAACTGTTTAGAAGATACTCTGCTGCCTTACCATGGTCAACCAGGATGAAGATTGCATTGGGCGCAGCTAAGGGTCTGGCATTCCTTCACGAAGCAGATAAACCTGTAATATACAGGGATTTCAAAACTTCAAATATCTTGCTAGACTCGGATTACACAGCTAAACTATCAGACCTTGGGCTAGCTAAGGATGGTCCTGAAGGGGAAGACACACATGTAACAACAAAATGCATTATGGGTACACGAGGCTATGCTGCTCCTGAGTACATCATGTCAGGTCACCTTTCCACCAAGAGTGATGTGTATAGCTATGGAGTAGTTTTGTTGGAATTGCTTACAGGAAGAAGAGTGGTGGATAAGACCCGGCCAAATAGAGAACGCAGCCTGGTGGAATGGGCAAGGCCTATTTTGAGAGATCAAAGAAGGCTGCATCATATTATAGACCCAAGATTGGAAGGGCAATTTCCTACGAAAGGAGCTATGAAAGTTGCTGCATTGACTTATAAATGCTTGAGCCACAACCCCAATCCCAGACCCACTATGAGTGATGTGGTGAAGATACTGGAGTCACTTCAGGATTTTGACGATGTGATCATAGGACCCTTTGTGTATGTGGCCGTAAGTGAAAGTGGCCTCTGA 1152 0.4453 MTSKRITWKSIVFILSCYKTRCPLQESEKQVLKQGSFQRVCLSDVSISSSTRVIEDLSISLVGPKLYTFTLEELREATHNFSWSNLLGEGGFGPVYKGFVDDKLKPGLKAQPVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCCEEEHRLLVYEHMARGSLENQLFRRYSAALPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDLGLAKDGPEGEDTHVTTKCIMGTRGYAAPEYIMSGHLSTKSDVYSYGVVLLELLTGRRVVDKTRPNRERSLVEWARPILRDQRRLHHIIDPRLEGQFPTKGAMKVAALTYKCLSHNPNPRPTMSDVVKILESLQDFDDVIIGPFVYVAVSESGL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1354 383 ProSiteProfiles Protein kinase domain profile. 81 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1354 383 Gene3D Phosphorylase Kinase; domain 1 42 163 - -
Apr5g1354 383 Pfam Protein tyrosine and serine/threonine kinase 84 359 IPR001245 GO:0004672|GO:0006468
Apr5g1354 383 PANTHER OS01G0588500 PROTEIN-RELATED 21 382 - -
Apr5g1354 383 PANTHER KINASE 1B 21 382 - -
Apr5g1354 383 Gene3D Transferase(Phosphotransferase) domain 1 164 369 - -
Apr5g1354 383 SUPERFAMILY Protein kinase-like (PK-like) 56 361 IPR011009 -
Apr5g1354 383 CDD STKc_IRAK 87 362 - -
Apr5g1354 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1354 Apr-Chr5 17774754 17776853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1354 68 359 Glycoside Hydrolase AT3G07070 53.559 1.64e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr5g1354 PK_Tyr_Ser-Thr 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1354 - - gmx:100805771 691.419