Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1353 ATGATGCACATGACCTTCTATTGGAGTCACCAAGTGACTCTCCTGATCGATTCATGGAAGACCCAGGATTGGATCGGTTACATCCTCACTTTGCTCGCATGCATCATCGTTTCTGTTTTCTATCAGTTTCTGGAGAATCGCCGTATTCGGTTAAAGCTGATCGGCATCGGAAAGCCCTTTCCGGCGGAGATCGAGACCCCTCTTCTGCGACGGAAGCTCGCCGGAAACGGTGCTAAGATGGGCGTGAAGGTGGCTGGAGCTTTTCTGTTTGGGTTGAGCTCGGCGATCGGGTACTTGTTGATGTTGTCCGTCATGTCCTTCAACGGTGGGGTCTTTGTGGCCATCGTTGTGGGTCTTGCTATTGGTTATTTCTTCTTCAGGAATGAGGGTGAAGATTCCATTGTCGTTGACACTTCTTGTGCCTGCGCTTAA 432 0.5023 MMHMTFYWSHQVTLLIDSWKTQDWIGYILTLLACIIVSVFYQFLENRRIRLKLIGIGKPFPAEIETPLLRRKLAGNGAKMGVKVAGAFLFGLSSAIGYLLMLSVMSFNGGVFVAIVVGLAIGYFFFRNEGEDSIVVDTSCACA* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1353 143 PANTHER COPPER TRANSPORTER 5.1-LIKE 1 143 - -
Apr5g1353 143 Pfam Ctr copper transporter family 4 51 IPR007274 GO:0005375|GO:0016021|GO:0035434
Apr5g1353 143 Pfam Ctr copper transporter family 82 126 IPR007274 GO:0005375|GO:0016021|GO:0035434
Apr5g1353 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1353 Apr-Chr5 17773807 17774558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1353 1 143 Inorganic Solute Cotransporters AT5G20650 49.315 7.52e-48 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1353 K14686 - gmx:100805457 259.225