Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1331 ATGGGCTATCTCAATTCAGTTTTGTCCTCTTCTAGCCAGGTTCATGCTGCTGATGAAGCACTTGTCAGCGGTGGGGGTCTCAGTCATAATGGCAAATTCAGCTACGGGTATGCTAGCTGCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAAACAAGAATTGATGGTGTCGATGGTGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGTTCGTGCTGCCGAGTATGTCAAGAAAAACCTGTTCAGTAATTTGATCAGTCACCCAAAATTTATTTCTGACACCAAATCAGCAATAGCTGATGCGTATAACCATACCGATTCTGAATTTCTGAAATCAGAAAATAGTCATAACAGAGATGCAGGATCAACTGCTTCGACTGCCATTTTAGTTGGTGACCGATTGCTTGTTGCAAATGTTGGGGATTCTAGAGCTGTTATATGCAGAGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGATCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTCATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCCCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAGGTTGACAGCTCCCTTGAGTTTCTTATTTTGGCCAGTGACGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTTCTATGATTAAAGCAATTGAGAATGCCGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAAAGAGGTAGTGCTGACAATATCACATGTGTTGTTGTTCGTTTCTTGATGAATCAAGGTGCTTCTTCTCATAGTACCTCTGGATGA 882 0.4365 MGYLNSVLSSSSQVHAADEALVSGGGLSHNGKFSYGYASCPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGVRAAEYVKKNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVSMIKAIENAEEAAKRLMQEAYQRGSADNITCVVVRFLMNQGASSHSTSG* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1331 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Apr5g1331 293 SMART PP2C_4 24 278 IPR001932 -
Apr5g1331 293 Gene3D - 26 285 IPR036457 -
Apr5g1331 293 PANTHER ALPHABET, ISOFORM E-RELATED 3 289 - -
Apr5g1331 293 Pfam Protein phosphatase 2C 61 273 IPR001932 -
Apr5g1331 293 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 289 - -
Apr5g1331 293 CDD PP2Cc 33 280 IPR001932 -
Apr5g1331 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Apr5g1331 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Apr5g1331 293 Coils Coil 243 267 - -
Apr5g1331 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1331 Apr-Chr5 17577198 17581576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1331 1 292 PP2C-type Phosphatase Gene Family AT4G31750 89.726 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1331 K17506 - gmx:547661 539.65