Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1321 ATGGGAATATATCTCAGTACTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCGTCTTCGATATGGTTTATCATCCATGCAAGGGTGGCGTGCATCAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGAGTCAACTTCATTTTTTGGTGTATATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCGAAGTTTCTTCACCAACAGGTCCTCAAAAGTGAAGAATACTTAGTTGGAGATATAGGAACCGCCCTTCAGAAAGCATTTTTAAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAGTTATCAGTCTTGGGGGATAAGTTTAACAAGTTTACTGGGATGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGTAATTTCCAAGTTGATGATTGGGCTTTTGAGGAGGGGCCTCACTCTGATTTTGCTGGACCTACTTCGGGAAGCACTGCCTGTGTTGCTGTTATTAGAAACAACCAACTTGTTGTTGCAAATGCTGGTGATTCACGTTGTGTAATATCTCGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAGAGAATAGTAAAAGCTGGTGGTTTTATTCATGCAGGACGCGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAGCAGAATAAGTTTCTTTCTGCTGAAAAACAAATAGTAACTGCCAATCCAGACATAAACACTGTTGAGCTGTGTGATGAAGATGAATTTGTGGTGTTAGCTTGTGATGGGATATGGGATTGCATGTCAAGTCAACAATTGGTAGATTTTGTTCATGAACTATTGCGCTCGGAAACGAAACTTTCTGTAGTGTGCGAAAGAGTACTGGACCGGTGTTTGGCACCATCAACTGCTAATGGGGAGGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAAAAAACTGCTCAATCCAGTGCACCAGCAGAAGAGCAATCCTCTGAATCTGATACAACACTTGAGAGAAGTGAAAGTTAG 1068 0.4176 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRASMEDAHAAYTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQVLKSEEYLVGDIGTALQKAFLRMDEMMRGQRGWRELSVLGDKFNKFTGMIEGLIWSPRSSDGNFQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERIVKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFVHELLRSETKLSVVCERVLDRCLAPSTANGEGCDNMTMILVQFKKTAQSSAPAEEQSSESDTTLERSES* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1321 355 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Apr5g1321 355 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 340 - -
Apr5g1321 355 SMART PP2C_4 13 327 IPR001932 -
Apr5g1321 355 MobiDBLite consensus disorder prediction 333 355 - -
Apr5g1321 355 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Apr5g1321 355 CDD PP2Cc 23 329 IPR001932 -
Apr5g1321 355 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Apr5g1321 355 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Apr5g1321 355 Pfam Protein phosphatase 2C 155 315 IPR001932 -
Apr5g1321 355 PANTHER PROTEIN PHOSPHATASE 2C 1 340 IPR015655 GO:0004722|GO:0006470
Apr5g1321 355 Gene3D - 1 330 IPR036457 -
Apr5g1321 355 SMART PP2C_SIG_2 28 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1321 Apr-Chr5 17513532 17520993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1321 1 341 PP2C-type Phosphatase Gene Family AT2G25070 76.833 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1321 K17499 - gmx:100787778 654.44