Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1318 ATGGCTGTCTTTCCAAGAACTGTTGCCTCTTCTCTTTTGCTCCTTTTCCTTCTCTTCGGTTTCTCTGCAGCTAAGGAACTATTGGTGGGAGGCAAAATTGATGCATGGAAGATTCCATCCTCTGAAGCAGATTCCCTCAACCAATGGGCTGAAAGGTCTCGTTTCAGAGTAGGCGATCATCTTGTATGGAAATATGAGAGTGGAAAAGACTCTGTTTTGGAAGTAACAAAGGAAGATTATGCTAATTGCAGCTCTTCAAAGCCCATTAAAGAGTACAGTGATGGCAACACTAAGGTGAGGCTTGACCATCCTGGAGCATACTACTTCATAAGTGGGGCAAAGGGGCACTGTGAGAAGGGGCAAAAAGTGATTGTGATTGTAATGTCTCAAAGGCACAGTTACACAGGGATTTCTCCTGCACCTTCTCCAGCAGAGTTGGAAGAAGGACCAGCAGTTGCTCCTACTAGCAGTGCCACGGCGTTGCAAGCTGTTATTGTGTTTGTTCTTGGAATGTTGGCTATGTATGTGGGTTTTCTCATGTAA 543 0.4494 MAVFPRTVASSLLLLFLLFGFSAAKELLVGGKIDAWKIPSSEADSLNQWAERSRFRVGDHLVWKYESGKDSVLEVTKEDYANCSSSKPIKEYSDGNTKVRLDHPGAYYFISGAKGHCEKGQKVIVIVMSQRHSYTGISPAPSPAELEEGPAVAPTSSATALQAVIVFVLGMLAMYVGFLM* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1318 180 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Apr5g1318 180 PANTHER EARLY NODULIN-LIKE PROTEIN 3 7 172 - -
Apr5g1318 180 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Apr5g1318 180 Gene3D - 23 133 IPR008972 -
Apr5g1318 180 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Apr5g1318 180 CDD OsENODL1_like 25 128 IPR041846 -
Apr5g1318 180 PANTHER BLUE COPPER PROTEIN 7 172 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1318 Apr-Chr5 17501754 17502646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1318 11 175 Phytocyanin Superfamily AT2G25060 51.765 1.33e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1318 - - gmx:100305551 278.87