Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr5g1310 | ATGGAAACAACATGCGTCGACACTTCTCTCAACCTTAACGTTATTCCTTCTACTCACATGGACGTTGCGGCGGAGGTTATGATCGAAGAGTTGCAGCGTCTAAGTAGTGAGAACAAGTGGTTAACTGAAACGCTGAACCAGATGTGTGAGAACTATCTTGCTTTGCAAAAGCATTTCAATCAATTCAGCCAACTGAGGGACACCAATTTTGAAAAAGAAGCGACACCATCGATGAAAAGAAAGGTCGAGAGTGAGAATTGTGTAAATCTGTTTGGTATTAACGCCTATGCAGAGTGCAGCACTACTACTGAGGAAGAACATTTCAAGAGGCCCAAGCATAACACTTCGCCAAAGGTTTCTAAAGTTTTTGTACGGACGGATGCATCTGATACTAGCTTATATGTGAGGGATGGATATCAGTGGAGAAAATATGGTCAGAAAGTAACCAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGCTCGTATGCCCCAAGCTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGTAGAAGACCCAACTATATTGGTGACAACTTACGAAGGGGAACACAACCATGCACTTCAGCAAGCAGAAATATCAGTGAGTTCAAGCCAAAGTGAAACGTGTTCAGTTTCAGTTCCCTCTTCATCACCCTTACCCTCTCCAATGAATCGGAATACAGGTCCAACCGTAACGCTTGACTTGGTCCAGTCAAAATTGGTTGACATCAATGCTCAAAAGTCATCTATCCAGAAGTTTATAGTTCAACAAATGGCTACTTCTTTGACAAGAGATCCTAATTTTACAGCAGCTCTTGCTAATGCCATCTCAGGAAGAATTCTAGACCATGCTTCTACGGGAAAGCCTTGA | 873 | 0.4296 | METTCVDTSLNLNVIPSTHMDVAAEVMIEELQRLSSENKWLTETLNQMCENYLALQKHFNQFSQLRDTNFEKEATPSMKRKVESENCVNLFGINAYAECSTTTEEEHFKRPKHNTSPKVSKVFVRTDASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPSCPVKKKVQRSVEDPTILVTTYEGEHNHALQQAEISVSSSQSETCSVSVPSSSPLPSPMNRNTGPTVTLDLVQSKLVDINAQKSSIQKFIVQQMATSLTRDPNFTAALANAISGRILDHASTGKP* | 291 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr5g1310 | 290 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 283 | IPR044810 | GO:0003700 | |
Apr5g1310 | 290 | SMART | WRKY_cls | 135 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr5g1310 | 290 | ProSiteProfiles | WRKY domain profile. | 137 | 196 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr5g1310 | 290 | Gene3D | WRKY domain | 118 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr5g1310 | 290 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 1 | 283 | - | - | |
Apr5g1310 | 290 | SUPERFAMILY | WRKY DNA-binding domain | 132 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr5g1310 | 290 | Pfam | WRKY DNA -binding domain | 137 | 193 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr5g1310 | Apr-Chr5 | 17452720 | 17454758 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr5g1310 | 3 | 289 | WRKY Transcription Factor Family | AT1G80840 | 44.518 | 6.11e-77 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Apr5g1310 | WRKY | 3.3e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr5g1310 | - | - | gmx:100127373 | 407.912 |