Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr5g1309 | ATGGAAGAGTGTCACACGGTGTTTGGGAAGTACGAAATGGGGAGGCTCCTAGGGAAGGGGACGTTTGCCAAAGTGTATTACGGAAAGGAAATAAGCACGGGCGAGAGCGTGGCGATTAAGGTAATAAACAAAGAACAAGTGAAGAAAGAAGGGATGATGGAGCAAATCAAACGCGAGATATCAGTTATGCGTTTGGTGAGACACCCAAACATAGTGGAACTAAAGGAAGTCATGGCCACCAAGACTAAAATCTTCTTCGTAATGGAGTACGTGCGTGGCGGCGAACTCTTCGCCAAAATTTCCAAAGGCAAACTCAAAGAAGATCTCGCCCGTAAATATTTCCACCAACTAATCAGCGCCGTTGATTACTGCCACAGCAGAGGAGTTTCCCACCGCGACCTCAAGCCAGAAAATCTCCTCCTCGACGACAACGAAAACCTCAAAATCTCCGACTTCGGCCTCTCCGCCCTGCCCGAACAGCTTCGCTACGATGGACTCCTCCACACCCAGTGCGGCACCCCTGCTTACGTGGCACCCGAAATTCTCAGAAAAAAAGGCTACGACGGTTCCAAAGCAGATATTTGGTCATGCGGCGTCGTTTTGTACGTTTTGCTCGCTGGCTTTCTTCCTTTTCAAGACGAGAATCTCATGACTATGTATAATAAAGTTCTCAGAGCCGAATTTCAGTTCCCACCGTGGTTTTCATCTGAATCGAGGAGATTGATCTCCAAGATTCTAGTCGCCGACCCGGCCAAACGAACCACGATTCCCGCTATAATGCGCGTGTCATGGTTTCGGAAAGGTTTTTCCGTTACGGACACGTGTCAGTTAGAAGAGAAGGTTACGGAGGACGGCTCTAGAACTGCGACGAGCAAGGTTTCGTCGTCGCCCAAGTTCTTCAACGCGTTTGAGTTCATCTCGTCCATGTCTTCGGGGTTCGATCTATCGGGTCTGTTCGAGAGCAAGAGGAAGACGGGGTCGGTCTTCACGTCGAAGTGTTCGGCGCCGGCGATTGTGTCCAAGATTGAGACGGCGGCGAAGGGGTTGAGTTTCAGGGTGGCGGAGGTGAAGGATTTCAAGATTAAGTTGCAAGGCGCCACGGAGGGAAGGAAGGGGAGGCTGTTGGTGACGGCGGAGGTGTTCGAGGTGGCGCCAGAAGTCGCCGTCGTTGAGTTCTCGAAGTCCGCCGGCGACACCTTGGAATATGCTAAGTTCTGCGAAGAAGACGTGAGACCTGCGCTGAAAGACATTGTGTGGACGTGGCAAGGTGATGCCACGTGTAGCGCTAACGTCCCCGGCTGTCACGGTGACGAGTTTCAAAAGCAAGCGATTACTATTTAA | 1341 | 0.513 | MEECHTVFGKYEMGRLLGKGTFAKVYYGKEISTGESVAIKVINKEQVKKEGMMEQIKREISVMRLVRHPNIVELKEVMATKTKIFFVMEYVRGGELFAKISKGKLKEDLARKYFHQLISAVDYCHSRGVSHRDLKPENLLLDDNENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEILRKKGYDGSKADIWSCGVVLYVLLAGFLPFQDENLMTMYNKVLRAEFQFPPWFSSESRRLISKILVADPAKRTTIPAIMRVSWFRKGFSVTDTCQLEEKVTEDGSRTATSKVSSSPKFFNAFEFISSMSSGFDLSGLFESKRKTGSVFTSKCSAPAIVSKIETAAKGLSFRVAEVKDFKIKLQGATEGRKGRLLVTAEVFEVAPEVAVVEFSKSAGDTLEYAKFCEEDVRPALKDIVWTWQGDATCSANVPGCHGDEFQKQAITI* | 447 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr5g1309 | 446 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 90 | - | - | |
Apr5g1309 | 446 | ProSiteProfiles | Protein kinase domain profile. | 11 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g1309 | 446 | Gene3D | Transferase(Phosphotransferase) domain 1 | 91 | 271 | - | - | |
Apr5g1309 | 446 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED | 1 | 432 | - | - | |
Apr5g1309 | 446 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
Apr5g1309 | 446 | CDD | CIPK_C | 301 | 415 | - | - | |
Apr5g1309 | 446 | SMART | serkin_6 | 11 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g1309 | 446 | Pfam | NAF domain | 297 | 354 | IPR004041 | GO:0007165 | |
Apr5g1309 | 446 | Pfam | Protein kinase domain | 11 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g1309 | 446 | ProSitePatterns | Protein kinases ATP-binding region signature. | 17 | 40 | IPR017441 | GO:0005524 | |
Apr5g1309 | 446 | CDD | STKc_SnRK3 | 10 | 264 | - | - | |
Apr5g1309 | 446 | ProSiteProfiles | NAF domain profile. | 295 | 320 | IPR018451 | GO:0007165 | |
Apr5g1309 | 446 | Gene3D | Kinase associated domain 1, KA1 | 294 | 420 | - | - | |
Apr5g1309 | 446 | PANTHER | - | 1 | 432 | - | - | |
Apr5g1309 | 446 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 301 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr5g1309 | Apr-Chr5 | 17436092 | 17437822 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr5g1309 | 2 | 430 | CBL-interacting serine-threonine protein kinases | AT5G10930 | 71.591 | 0.0 | 650 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-CHK1 | Apr5g1309 | Pkinase | 1.5e-75 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr5g1309 | - | - | gmx:100817520 | 746.117 |