Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1264 ATGGGAAAGCATTGGTCTTTCTTCAAAATTATGAGTACCCTTGTGTTGTGCATCCGTCTTTTGTCTAAAGTCTGTTTGGCTGGGATTCAATATAATGGCACAGTCTCACCCGGGTTCAAAGGTTCTCAAATGAATTGGATTGATAGAAATGGAATGTTCCTCGTGTCAAAAGAGGGTAATTTTGCCTTTGGATTTGTCACCACTGCAAATGACAGCACCCAGTTTCTATTGGCAATCATCCATACGGCCAGCTCTACCCTTGTTTGGACTGCAAATAGAGCACTTCCTGTTGCCAATTCCGACAATTTTGTGTTTGATGATAAGGGCAATGCCTTTTTACAGAAAGATGGGAACGCGGTCTGGTCTACAAATACAAGTGGCAAAGGGGTTTCTTCAATGGAATTGCAAGACACAGGAAATTTGGTTTTGCTAGGGAGCGATAATAGTACAGTGATTTGGCAAAGTTTCAGCCACCCAACAGATACTTTGTTGCCAACTCAGGACTTCACAGAGGGAATGAAACTCATCAGTGATCCTAATTCAAACAATTTGACCCATATTCTTGAGATCAAGTCTGGTAATGTTGTTCTCACAGCAGTTTTTAAGACTCCTCAGCCTTATTGGACTATGCAAAACGACAACCGCAAAACTATCAATCAAGATGGTGATGAGGTTGCTTCCGCAAACATAAGTGAAAATTCCTGGAGGTTCTATGATAAGAACAGATCTTTGTTGTGGCAATTCATTTTCTCTTCAGATCCGGGTACTAATGAGACTTGGGTTGCAGTTTTGGGGAGTGATGGCTTCATCACTTTCTCTAACCTAAACAGTGGAGGGTCAAATGCTGCATCACCAATAAGAATACCACAAGATCCTTGTGCTACACCAGAGCCTTGTGATCCATACAACATTTGCACTGGCAATCAGAGGTGTAGCTGTCCTTCTGCTGTTCCAAGTTGTGATCCTGGTTTTGTCTCTCCTTGTGGTGACTCAGAACATTCCGTTGAGTTAGTGAAAGCTGATGCTGGACTCTATTACTTTGCACTTGAATTCCTTCAACCCTTTTCCAAAACTGATTTGGCTGGTTGCCAAACTTCTTGCAATGGAAACTGCTCATGCCTTGCTATGTTTTTTCAGAAAAGCTCAGGGAACTGTTTCCTCTTGGATACCATAGGAAGCTTTGAGAAATCTGGTGCTGATTCTGGTTATGTTTCTTACATTAAGGTTTCGAGGGATGCAAGTGCTGGCTCAGGAGGCAGTGGAAGCAGCAATAAGCACACCATAGTTGTTGTGGTTATTGTCATATTAACTTTCCTTGTCATTTGTGGTCTGGTCTTTGCAGGAGTTAGATACTGCAGAAAAAAGCAACAATCGCCTGATTCTCCTCGAGAGAATTCAGAAGAGGACAATTTCTTGGAGAATTTAACTGGTATGCCAATTCGTTACAGCTACAAAGATCTTGAAGCTGCTACTAATAACTTCTCCGTGAAGCTTGGGCAAGGGGGTTTTGGGTCAGTTTATAAAGGAGTACTACCAGATGGGGCTCAACTAGCAGTGAAGCAGTTGGAAAGTATTGGACAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGTATCATTGGCAGCATTCATCACCTCCATTTGGTTAGGCTTAAAGGGTTCTGTGCTGATGGAACTCATAGGCTTCTTGCTTATGAGTACATGGCCAATGGCTCATTGGATAAGTGGATTTTCAAGAAAAACAAGGGTGAGTTTTTGTTGGATTGGGATACAAGGTTTAATATAGCTCTTGGAACAGCAAAAGGACTTGCTTATCTACATGAAGATTGTGACTCAAAGATTGTTCATTGTGACATCAAGCCAGAAAATGTACTTCTGGATGATCATTTCATGGCCAAGGTTTCTGATTTTGGTCTGGCTAAGCTCATGAATAGAGAACAAAGCCATGTTTTTACCACACTGAGGGGCACAAGGGGCTATCTTGCACCGGAGTGGATAACAAACTATGCTATATCAGAGAAAAGTGATGTTTACAGTTATGGAATGGTGTTGCTAGAGATCATTGGAGGAAGGAAAAGCTATGACTCTAATGAAAGTTCAGAGAAATCCCATTTCCCAACATATGCTTTCAAGATGATGGAAGAAGGAAAACTGAGAGATATTTTTGACTCAGAGTTGAAAATTGATGAGAATGATGACAGGGTTCAATGTGCTATAAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCAATGAGGCCTTCTATGACCAAAGTAGTTCAAATGCTAGAGGGTCTTTGTACTGTTCCTAAGCCACCAACTAGTTCTCCCTTGGGTTCACGCCTTTTCTCTACTGTATTCAAATCCACAAGTGAAGGGGGCACTTCTTCTGGTCCATCAGATTGTAACAGTGATGCTTATCTCTCTGCAGTTCGCCTCTCAGGGCCTAGATAA 2451 0.4182 MGKHWSFFKIMSTLVLCIRLLSKVCLAGIQYNGTVSPGFKGSQMNWIDRNGMFLVSKEGNFAFGFVTTANDSTQFLLAIIHTASSTLVWTANRALPVANSDNFVFDDKGNAFLQKDGNAVWSTNTSGKGVSSMELQDTGNLVLLGSDNSTVIWQSFSHPTDTLLPTQDFTEGMKLISDPNSNNLTHILEIKSGNVVLTAVFKTPQPYWTMQNDNRKTINQDGDEVASANISENSWRFYDKNRSLLWQFIFSSDPGTNETWVAVLGSDGFITFSNLNSGGSNAASPIRIPQDPCATPEPCDPYNICTGNQRCSCPSAVPSCDPGFVSPCGDSEHSVELVKADAGLYYFALEFLQPFSKTDLAGCQTSCNGNCSCLAMFFQKSSGNCFLLDTIGSFEKSGADSGYVSYIKVSRDASAGSGGSGSSNKHTIVVVVIVILTFLVICGLVFAGVRYCRKKQQSPDSPRENSEEDNFLENLTGMPIRYSYKDLEAATNNFSVKLGQGGFGSVYKGVLPDGAQLAVKQLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCADGTHRLLAYEYMANGSLDKWIFKKNKGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKSYDSNESSEKSHFPTYAFKMMEEGKLRDIFDSELKIDENDDRVQCAIKVALWCIQEDMSMRPSMTKVVQMLEGLCTVPKPPTSSPLGSRLFSTVFKSTSEGGTSSGPSDCNSDAYLSAVRLSGPR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1264 816 Gene3D Phosphorylase Kinase; domain 1 455 566 - -
Apr5g1264 816 PIRSF SRK 8 812 IPR024171 GO:0004674
Apr5g1264 816 CDD PAN_AP_plant 324 410 - -
Apr5g1264 816 SUPERFAMILY Protein kinase-like (PK-like) 472 763 IPR011009 -
Apr5g1264 816 Gene3D Transferase(Phosphotransferase) domain 1 567 770 - -
Apr5g1264 816 Pfam Protein kinase domain 496 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1264 816 SMART blect_4 45 159 IPR001480 -
Apr5g1264 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 816 - -
Apr5g1264 816 SMART serkin_6 492 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1264 816 CDD STKc_IRAK 498 765 - -
Apr5g1264 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Apr5g1264 816 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Apr5g1264 816 CDD B_lectin 47 159 IPR001480 -
Apr5g1264 816 Pfam D-mannose binding lectin 86 169 IPR001480 -
Apr5g1264 816 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Apr5g1264 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 816 - -
Apr5g1264 816 Gene3D - 45 158 IPR036426 -
Apr5g1264 816 ProSiteProfiles Protein kinase domain profile. 492 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1264 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 212 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1264 Apr-Chr5 16988719 16992265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1264 436 774 Receptor kinase-like Gene Family AT5G20050 46.240 3.64e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr5g1264 Pkinase 7.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1264 - - gmx:100791158 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0176 9 2292926 2296344 Apr5g1264 5 16988719 16992265 PCT