Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1263 ATGATGAGTTCAGCTCTGACTAACCATCTGGTGCAGTGCTCAATCGCCACCACTTCCAACACCAAAACCCATTTTCCCGCCAAATTACATTCCTCATCTTTCTCTACCATCAAGCTTCGCCCCGACAACCCCAACCACCATGCTTCTTCGGATTTAGCGGTTCCAAGATGTAGCAGGAGAGGGCTAATATACATAGCCACGTTGCCATGTCTTATTCCCCTAACTCAAATCATTGGTTCTCTCCGAGCCAACGCTAAACAGGCAGTTACAAATGAATATCTTCTTATTAAAGAAGAAGTGAGGAAGGTATTGTCAAAAGGAAAGGCTGCAGGAGTGCTTCGTTTGGTGTTCCATGATGCTGGAACCTTTGATATCGATGAAAATACAGTAGACTTATCATATGTTCCTCAGGTTCTGCAGAAAGCGAAAACTCAGATAGATGCTATTCAACCAGTGTCCTGGGCGGATATGATAGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCACCTATCCAAGTTTCACTGGGCAGACTAGATTCACTGGTGCCTGATCCTGAAGGGAGACTTCCTGAGGAATCTCTCAATGCTTCCGGTTTGAAGAAATGCTTCCAGAGAAAAGGCTTTTCAACACAAGAACTTGTAGCTTTGTCTGGAGCCCACACTATTGGAGGTAAAGGTTTTGGAAGCCCAATTTCTTTTGACAATTCATATTATAAGGTTCTTTTGGAGAAGCCGTGGACATCTTCAGGTGGCATGTCGAGTATGATTGGCCTTCCTTCAGATCATGCACTTGTTGAGGATGATGAGTGCTTAAGATGGATTAAAAAATATGCAGACAATGAGAATACGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAATAGCTTATAA 927 0.4358 MMSSALTNHLVQCSIATTSNTKTHFPAKLHSSSFSTIKLRPDNPNHHASSDLAVPRCSRRGLIYIATLPCLIPLTQIIGSLRANAKQAVTNEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDIDENTVDLSYVPQVLQKAKTQIDAIQPVSWADMIAVAGAEAVEVCGGPPIQVSLGRLDSLVPDPEGRLPEESLNASGLKKCFQRKGFSTQELVALSGAHTIGGKGFGSPISFDNSYYKVLLEKPWTSSGGMSSMIGLPSDHALVEDDECLRWIKKYADNENTFFEDFKNAYVKLVNSGVRWNSL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1263 308 Gene3D Peroxidase, domain 2 193 295 - -
Apr5g1263 308 Gene3D - 97 302 - -
Apr5g1263 308 SUPERFAMILY Heme-dependent peroxidases 98 307 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 Pfam Peroxidase 106 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 ProSitePatterns Peroxidases active site signature. 109 120 IPR019794 GO:0004601
Apr5g1263 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 215 225 IPR019793 -
Apr5g1263 308 PRINTS Haem peroxidase superfamily signature 109 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 PRINTS Haem peroxidase superfamily signature 152 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 PRINTS Haem peroxidase superfamily signature 170 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 PRINTS Plant ascorbate peroxidase signature 109 124 IPR002207 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 PRINTS Plant ascorbate peroxidase signature 279 303 IPR002207 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 21 305 IPR044831 GO:0004601|GO:0034599
Apr5g1263 308 ProSiteProfiles Plant heme peroxidase family profile. 152 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr5g1263 308 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 21 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1263 Apr-Chr5 16984322 16988272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1263 60 306 Peroxidase AT5G47000 28.750 1.09e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1263 K00434 - gmx:100792735 454.521