Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1258 ATGCCGCATTTGCTGCACGGGAGGCTCGATGTGACCATATATGAAGTCGATACGCTACAAACTTTAAATGAGTGCAATTTCAATCTCTGCTTAAAGGGTACAAGTACAAGTGTGGGGAAGAGATTTCTGTCCCAACTCAAGAGTTTTCTGTTGTGCCAATGCCAATGCCAACCCGAGATTATCAGTATGGGTCTCTATGCAACGGTTGATTTAGATAAGGCAAGGGTTGGAAGGACTAGAATGATAAACAATCGACCCTCCAACCCCAAGTGGTACGAGACCTTTCACATATATTGTGCCCATTACATCTCAAACATTATATTCACAGTGAAACAAGATGACCCAATTGGAGCAACTCTAATTGGAAGAGCTTATGTTCCTGTTGAGCAAGCCATGAAAGGCAACATAGTGGATACATGGGTCGATATATTAGATGAGGACCATAAGCCCATACCAAGTGGCTCCAAAATCCACGTCCGTATGCAATATATTGATGCTAAGAATGACATAACCTGGTCTCGAGGAATAAGGACTCCATGGTTTGAAGGAGTTCCTCACACCTTCTTCCGTCAAAAAACTGGTTGCGAAGTTACTTTGTACCAAGATGCCCATGTTTCAGATCGTCACGTGCCATGGATCCCTATATCCGGAGGAAATTATGAGCATAGGAAATGTTGGGAAGATATTTATGCTGCCATTATGGATGCTAAGCACTTGATTTACATAACTGGCTGGTCTGTTTACACTGAAATAACCTTGGTTAGAGATCCAAATGAGTCAAGAACAAGAATCACCCTTGGGGAACTACTCAAGCAGAAAGCTGATGAAGGTGTCACTGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGTTCCAGACTTCAAGAAAGATGGTTTGATGGCAACCCATGATCAAGAAACTGCAGAATACTTCAAAAACACAAATGTGCGTTGTGTTTTGTGCCCTCGGAACCCGGATGATGGAAGAAGCGTAGTTCAAGGTTTTGAAATCTCAGCAATGTTCACTCATCACCAAAAAACTATAGTTGTTGATAGACAACTTGGTGGTGCTGATGTGGGGAGACGGCAGAGAACAATCACAAGTTTCCTTGGTGGCATTGATCTTTGTGATGGGAGGTATGATACTCAAGAACATCCTCTATTTTCAACTTTGAACACAGTCCATCATGATGATTTCCATCAGCCAAACTTCCCAGGCGCTTCCATCAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCACTGCAAGCTAGAAGGACCCATTGCATGGGATGTTTTGTTCAATTTTCAGCAAAGGTGGGAGAAGCAGGTTGGAAAAAAGTTCCTACTCCCTTCAAGCATGCTTGATGATTATCTTCTCCCTCAATCCACTGTGGCAAGGTCGGATGAAAATGAAGTATGGAATGTTCAGTTATTCAGATCCATTGATGGTGGTGCTGCTTTTGGCTTCCCTCAAGACCCAGAAGAGGCAGCTGAATTTGGCCTTGTTAGTGGGAAAGATAACATCATTGACAGAAGCATTCAGGATGCTTATATAAATGCTATTAGGCGTGCAAAGAACTTTATCTACATTGAAAATCAGTATTTCCTAGGGAGTTCATATGGTTGGCAAGCACGTGATATTAAAGTTGAGGATATTGGTGCTTTGCATCTTATACCAAAGGAACTGTCACTGAAGATCGTTGACAAGATTGAAGCAGGAGAGAGGTTTTGTGTGTATATTGTTATACCAATGTGGCCAGAAGGCATTCCTGAAAGTGCTTCAGTTCAAGCAATATTAGACTGGCAAAGGAGAACAATGGAGATGATGTATTCTGATATAGCTGAAGCCATTCGAAGAAAGCGAATTGAAGCCAACCCAAGGGACTACTTAACCTTTTTCTGCCTTGGAAATCGTGAGGGAAAGAAAGATAAAGAATACACTCCTCCAGAGGCACCAGAGCCTAATAGTGATTATAGTAGAGCACAACAGTCTAGGAGATTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATAAACCAAAGATCAATGGATGGAGCAAGGGACAGTGAGATTGCAATGGGTGGATTCCAACCAGGTCATATAGTATCAGAAGGGCCACCAAGAGGACAAATATATGGATTTCGACGTGCACTATGGTATGAGCATCTTGGGGATCTTCCTGATACAAGCATTTTTGACAATCCACAAAGGTTGGACTGCATCAGGCTTGTGAATCATCTTGCACAGATCAACTGGGACAAATACTCTAATGAAGCTTTTGATGAATATGACACTTTTCACCATCTCTTGCGCTACCCCGTAGAAGTAACATACGATGGAAAAATAGCAACTCTTCCAGGGTTTGAATATTTTCCTGACACCAAGGCTCGGATTCTTGGTTCCAAATCAGATTATCTTCCTCCAATTCTCACCACCTAG 2481 0.4212 MPHLLHGRLDVTIYEVDTLQTLNECNFNLCLKGTSTSVGKRFLSQLKSFLLCQCQCQPEIISMGLYATVDLDKARVGRTRMINNRPSNPKWYETFHIYCAHYISNIIFTVKQDDPIGATLIGRAYVPVEQAMKGNIVDTWVDILDEDHKPIPSGSKIHVRMQYIDAKNDITWSRGIRTPWFEGVPHTFFRQKTGCEVTLYQDAHVSDRHVPWIPISGGNYEHRKCWEDIYAAIMDAKHLIYITGWSVYTEITLVRDPNESRTRITLGELLKQKADEGVTVLMLVWDDRTSVPDFKKDGLMATHDQETAEYFKNTNVRCVLCPRNPDDGRSVVQGFEISAMFTHHQKTIVVDRQLGGADVGRRQRTITSFLGGIDLCDGRYDTQEHPLFSTLNTVHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPIAWDVLFNFQQRWEKQVGKKFLLPSSMLDDYLLPQSTVARSDENEVWNVQLFRSIDGGAAFGFPQDPEEAAEFGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWQARDIKVEDIGALHLIPKELSLKIVDKIEAGERFCVYIVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIAEAIRRKRIEANPRDYLTFFCLGNREGKKDKEYTPPEAPEPNSDYSRAQQSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGFQPGHIVSEGPPRGQIYGFRRALWYEHLGDLPDTSIFDNPQRLDCIRLVNHLAQINWDKYSNEAFDEYDTFHHLLRYPVEVTYDGKIATLPGFEYFPDTKARILGSKSDYLPPILTT* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1258 826 CDD C2_plant_PLD 1 164 - -
Apr5g1258 826 Pfam Phospholipase D C terminal 745 816 IPR024632 -
Apr5g1258 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 669 696 IPR001736 GO:0003824
Apr5g1258 826 PANTHER PHOSPHOLIPASE D ALPHA 3 2 826 - -
Apr5g1258 826 Pfam Phospholipase D Active site motif 670 696 IPR001736 GO:0003824
Apr5g1258 826 Pfam Phospholipase D Active site motif 340 379 IPR001736 GO:0003824
Apr5g1258 826 Gene3D Endonuclease Chain A 215 466 - -
Apr5g1258 826 Pfam C2 domain 8 142 IPR000008 -
Apr5g1258 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 339 379 IPR001736 GO:0003824
Apr5g1258 826 Gene3D C2 domain 51 172 IPR035892 -
Apr5g1258 826 SUPERFAMILY Phospholipase D/nuclease 515 743 - -
Apr5g1258 826 SMART C2_3c 8 140 IPR000008 -
Apr5g1258 826 Gene3D Endonuclease Chain A 488 708 - -
Apr5g1258 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 165 IPR035892 -
Apr5g1258 826 SUPERFAMILY Phospholipase D/nuclease 169 452 - -
Apr5g1258 826 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Apr5g1258 826 ProSiteProfiles C2 domain profile. 1 141 IPR000008 -
Apr5g1258 826 SMART pld_4 339 379 IPR001736 GO:0003824
Apr5g1258 826 SMART pld_4 669 696 IPR001736 GO:0003824
Apr5g1258 826 MobiDBLite consensus disorder prediction 643 662 - -
Apr5g1258 826 PANTHER PHOSPHOLIPASE D 2 826 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1258 Apr-Chr5 16941994 16945910 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1258 3 826 Phospholipase D Gene Family (Wang group) AT3G15730 64.663 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1258 K01115 - gmx:100791688 1398.26