Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1239 ATGTCAGTGTCATCATCATCTCGTTTTTTTGACACCATTAGTGAATGTCTCACCCTAGTTCAATCAGATTCCCATGAAACTCAAGAGAAAGCCCTTCAAACGCTTGTTTCCATCACCAAGGTAAGTCCCCAAAATAGAACCTTTCTCGCTCAAATAGATGGAGCCATCCCAACATTAGCTACACTCACAAATTCTTCCTCCCCCATTATCCAAACACTTTCTTTGTTGATCCTCTTCAACCTTTCCTTGAATCCTGATTTAAAGCAATCTCTTGCAGATATGGAAACTATTTATTACCTCAATTCCCTCATTAGCTCCTCGTGTTCTCTTGATTCTTGCAAATTGGCCTCCTCATTGATTTGTAGTTTAGCCATGCTTGATAAAAACAAAGCCAAATTTGGGGTGGCAGGTACAGTTCAGTTGCTAGTGAAAGGTATTGAAGGCTTTCATGATTCTGATGCACATCACCTTTTGAGTTCTTTGGCTGAACTTGTCAATTTCCATGGAAACTGCACCTTGGCTGTGCGAGCTGGTGCAGTTCCAGTGCTACTAGGAGTTGTTCAAAGCACTGATAACGAGGACTTATCTTCAACTTCACTTACTGTTCTTGGTCTCCTTGCAAGGTTTGATGAAGGGTTAAATGGTTTGAAGAAAAGTGATGAGATAATTAAGTCAATGTTAAGTGTGTTGAAAGGGAGGTCGTTGTTGAGTAAAGAGGGTGCAGCTGATATCCTTCTTCGCCTCTTTGATGATAGTGAAAGTTGTGTCACAGAGGCTTTGATGTTACCTGAGTTCTCAACTGTATTAGCTGATCTTTGTGTGAGGGGTTCTGTGAGAGTTCGAGATAAGGCTGATTTGTTAATGAGAAAGATGGCAAAGTTGAGCTTAGACTCTGATATGGAACCAAGCTTCCTATAA 918 0.4085 MSVSSSSRFFDTISECLTLVQSDSHETQEKALQTLVSITKVSPQNRTFLAQIDGAIPTLATLTNSSSPIIQTLSLLILFNLSLNPDLKQSLADMETIYYLNSLISSSCSLDSCKLASSLICSLAMLDKNKAKFGVAGTVQLLVKGIEGFHDSDAHHLLSSLAELVNFHGNCTLAVRAGAVPVLLGVVQSTDNEDLSSTSLTVLGLLARFDEGLNGLKKSDEIIKSMLSVLKGRSLLSKEGAADILLRLFDDSESCVTEALMLPEFSTVLADLCVRGSVRVRDKADLLMRKMAKLSLDSDMEPSFL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1239 305 PANTHER U BOX DOMAIN-CONTAINING 4 299 - -
Apr5g1239 305 Gene3D - 4 297 IPR011989 -
Apr5g1239 305 PANTHER KINESIN-ASSOCIATED PROTEIN 4 299 - -
Apr5g1239 305 SUPERFAMILY ARM repeat 12 292 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1239 19 284 U-box Gene Family AT1G23030 27.437 5.83e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1239 - - gmx:121174819 447.203