Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1238 ATGACAAAGAAGAAGAATCCCCTGGTTTTTATGGACGTGTCCATCGATGGGGATCCTGTTGAAAGGATGGTCTTTGAGCTTTTCTTTGATGTTGCTCCCAAGACTGCGGAAAACTTTCGTGCATTATGTACAGGAGAAAGAGGTGTCAGTCCAAATACTGGAAAATCACTACACTACAAGGGTTCTTTTTTCCATCAGATTATAAAAGGTGCCATTGTACAGGGTGGTGATTTTGTCAATCGAAATGGTACTGGTGGTGAAAGTATTTATGGTTCCAAGTTCCCTGATGAGTCACCTAGGTTGAAGCATGATGCTTCAGGTCTTTTATCAATGGCAATTGCAGACCGTGACACTGTTGGTTCTCATTTTATGATCACTTTGAAAGCTGATCATCACCTTGACAGGAAGCATGTAGTCTTTGGGAAGCTTGTGCAGGGACATAATGTTTTGAAGAAAATTGAAGAAGTGGGTGATGAAGAAGGGCATCCAACTGTAACTGTTAAAATCATTAACTGTGGTGAATATAATGAGGATGGAAAGAAGGTAAATAAGTCAAAAATGGGAAGGGATGGATCTTCTGAAGCCAATAGTCATGAAACACGGAGAAAGGGAAAGCATAAAAAATCTTCCAAAGACCGAAGGAAGAGGAGAAGATACTACTCATCAGATTCAGGGAGTTCTTCAGATTCTGATCTGGAATCTTCAGAAACTGATAGTGATTCTGAGTCGGATATATCCTCATCATCTTACATAAGCTCCTCCAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAAGAAAGATAAATATAGACGAGGAAAAAGAAGAGATAAACGCCGCGACAAGAAGCGAAGGAGACGTGATAAGAGATCAAAGCGGAAATCAAGAAGGGAATCTGGCACTGATTCGGAAAGTGAGAGTAACAGTGACAGTAGCTCTAAAGGTGAAAGTACTGATGCCCAACGGAAAGGGCTGAAGCGTAAAGATCATTCTCAGAAAAATGCAGCTGAAATTAAATCTCCCTTGATTGTTGGGAAAGATGTACCTCCTGTGCATCACAAAAAGGAGGAAGGGGGTATCCTAGAGAACGAGGAAAAATTGTCTAAGGAAAACGGAGAACGGCATAGCAATGGCAATGGAGCTAACTATAGATCTGACGGAAGTGAAGAGAGGCACCCTGACGTGATGGATGATCATTCGGGCAAATCTAGGAGTCGAAGTGCCAGTCCTAAGCGAACCATGAGTAGGAGTATGAGTATTAGTCCCAGGAGGAGTGAGAGCAAGAGCCCAAGCATTACTCCCAAAAGGAGATTGAGCAAAGGTCCAAGCATTAGTAGAAGCCCTCCTCCATCACGGAGGAGTTTTAGTAGAAGTCCTGTAAGAAGCATCAGCAGGAGTCCAAGCAGAAGCATCAGTAGAAGTCCAGTGAGGGGCAGGAAGGGCAGAAGTGTCAGTAGAAGCCCTGTGAGAAGCCCCGTGAGAACTCGTTCTCTTAGAAGTGTCAGCAAGAGCCCTGTAAGATCCCATTCTCGAAGCCACTGGAGCAGGACTTCTCCCAGAGCATCATCACGAAAAACAATCAGCAGAAGCCCTGCAAGAGTTTCAAGAAAGAGTGTAAGCCGTAGTCCAGTTAGATCATCCGCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTTCCTTCAAAGAGAAGCATCAGCCGAAGTCCTGTCAGAGCACCAAGTAGAAGCAATCGTCGCAGTTACTCCAGGAGTCCTAGCCCTGTTCGAAGGACAAGGACACCTCGTGGGAGGAGTGTGTCGAGGAGCGATTCACCTGATGCTTCACCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGGTACTCGTATGCAAGAAGGTACAGAACCCCCTCTCGGTCTCCTGTGAGGTCATATCGTTACAATGGAAGAAGTGACCGTGACAGGTATTCTAGTTACAGAAGGTATTCCCCTAGGCGATACAGGAGCCCACCACTGCGTGGAAGAACTCCCCCAAGGTACCGAGGCAGGAGGAGCAGGACGCCATCTGTTTCACGCAGCCCACGATACCGACCTCGACGATATAGCCGAAGTCGGAGCCCAGTTCGCAGTCGTTCCCCAGTTGAACCATATCGATCTCGCCCCTCTCCTCGTGTGGAGAGGCATGCATCTTCACGGAGCAGGAGTCCATCAAAATCTAGGTCCAGGTCTAGGTCTTCTGTGGAATCACGATCTCCACGGAAAGCAAGTAGAGATAGCAGGTCAGGCTCATCGTCCAGAAGCCCAGATGGAAAGAAAGGCTTGGTCTCATATGGCGATGGTTCTCCATATTCGGGCCAAAGATGA 2343 0.4656 MTKKKNPLVFMDVSIDGDPVERMVFELFFDVAPKTAENFRALCTGERGVSPNTGKSLHYKGSFFHQIIKGAIVQGGDFVNRNGTGGESIYGSKFPDESPRLKHDASGLLSMAIADRDTVGSHFMITLKADHHLDRKHVVFGKLVQGHNVLKKIEEVGDEEGHPTVTVKIINCGEYNEDGKKVNKSKMGRDGSSEANSHETRRKGKHKKSSKDRRKRRRYYSSDSGSSSDSDLESSETDSDSESDISSSSYISSSSDDRRRKRKRSKKDKYRRGKRRDKRRDKKRRRRDKRSKRKSRRESGTDSESESNSDSSSKGESTDAQRKGLKRKDHSQKNAAEIKSPLIVGKDVPPVHHKKEEGGILENEEKLSKENGERHSNGNGANYRSDGSEERHPDVMDDHSGKSRSRSASPKRTMSRSMSISPRRSESKSPSITPKRRLSKGPSISRSPPPSRRSFSRSPVRSISRSPSRSISRSPVRGRKGRSVSRSPVRSPVRTRSLRSVSKSPVRSHSRSHWSRTSPRASSRKTISRSPARVSRKSVSRSPVRSSARSLSRSSGRVPSKRSISRSPVRAPSRSNRRSYSRSPSPVRRTRTPRGRSVSRSDSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSSYRRYSPRRYRSPPLRGRTPPRYRGRRSRTPSVSRSPRYRPRRYSRSRSPVRSRSPVEPYRSRPSPRVERHASSRSRSPSKSRSRSRSSVESRSPRKASRDSRSGSSSRSPDGKKGLVSYGDGSPYSGQR* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1238 780 MobiDBLite consensus disorder prediction 407 473 - -
Apr5g1238 780 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Apr5g1238 780 MobiDBLite consensus disorder prediction 348 373 - -
Apr5g1238 780 MobiDBLite consensus disorder prediction 595 626 - -
Apr5g1238 780 Gene3D - 1 175 IPR029000 -
Apr5g1238 780 MobiDBLite consensus disorder prediction 385 405 - -
Apr5g1238 780 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 434 - -
Apr5g1238 780 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Apr5g1238 780 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Apr5g1238 780 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Apr5g1238 780 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Apr5g1238 780 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Apr5g1238 780 MobiDBLite consensus disorder prediction 488 508 - -
Apr5g1238 780 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Apr5g1238 780 MobiDBLite consensus disorder prediction 515 594 - -
Apr5g1238 780 MobiDBLite consensus disorder prediction 316 335 - -
Apr5g1238 780 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 1 434 - -
Apr5g1238 780 MobiDBLite consensus disorder prediction 639 654 - -
Apr5g1238 780 MobiDBLite consensus disorder prediction 177 780 - -
Apr5g1238 780 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Apr5g1238 780 MobiDBLite consensus disorder prediction 177 200 - -
Apr5g1238 780 MobiDBLite consensus disorder prediction 734 753 - -
Apr5g1238 780 MobiDBLite consensus disorder prediction 201 215 - -
Apr5g1238 780 MobiDBLite consensus disorder prediction 259 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1238 Apr-Chr5 16812557 16818910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1238 25 170 U-box Gene Family AT5G67530 41.216 1.59e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1238 K09566 - rcu:8278566 491.886